DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28B and Serpina4

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:378 Identity:92/378 - (24%)
Similarity:183/378 - (48%) Gaps:39/378 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTL---VANNYRSLLSD 83
            |.::||||:::|:.:||:|..:.::::...:||.|..::...|.|:..|..   :...:|||...
  Rat    60 YHLIASQNSEKNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPEIHEGFRSLQHT 124

  Fly    84 LKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTRG 148
            :.|..|...:.:.:.:.:::...::.||......::.:|.......|..:|..::|:::...|:|
  Rat   125 IARPFTEPQISVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEAAVQLINNYVKQNTQG 189

  Fly   149 MIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSG 213
            .|:|:|  .|.:.|....|||.|:|:|.|...|.:.:...:||||..|.::.:.|| |.......
  Rat   190 KIKNLV--SDLSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVVKIPMM-LQDKEDHW 251

  Fly   214 YIDD--IDAKIIELPYWNSTLSMRIILP-----NSVDGL----------RKLKEKVGFIDYHLEK 261
            |::|  :...::.:.|....::. .|||     |.|:.:          |.|:.:..:       
  Rat   252 YLEDRRVPCTVLRMDYRGDAVAF-FILPDQGKMNEVEQVLSPGMLLRWKRLLQNRFFY------- 308

  Fly   262 KSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGE 326
            :.:.::||||.|.:..:|..|..:||..|:|.|:|:.:.:..:....:.|:..|..|.::|.|.:
  Rat   309 RKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSNISKKEKLYLSKVFHKTVLDVNEVGTK 373

  Fly   327 ASAATGVLTRRKKSIDNLIQPPMEF-IADHPFFYVIH--DNKVIYFQGHIVEP 376
            |:||||.......:     ||...: |.:.||..:::  .::.|.|.|.:|.|
  Rat   374 AAAATGSFATFFSA-----QPKKRYLIFNRPFLVILYSTSSQDILFMGKVVNP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 91/376 (24%)
Serpina4NP_659565.2 serpinA4_KST 41..423 CDD:381020 92/378 (24%)

Return to query results.
Submit another query.