DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpinb2

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001167641.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:404 Identity:111/404 - (27%)
Similarity:198/404 - (49%) Gaps:59/404 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSE-------------------NK 70
            :...|:.:|:..||.|....:::|.:.:||.|.:::..||:|:|                   .:
Mouse    19 IEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYGITTRNPENFSGCDFAQ 83

  Fly    71 TLVANNY-----------------RSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKA 118
            .:...||                 .||.|.:...:...:|..||:::..|......|:.||::|.
Mouse    84 QIQKENYPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLFGEKSARFKEEYIQLSKKY 148

  Fly   119 FKAKAKSIR-LDDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFK 182
            :..:.:::. |:....|...:|||:..:|:|.|.|::.....:.||...||||:||||:|...|:
Mouse   149 YSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTKMVLVNAVYFKGKWKTPFE 213

  Fly   183 ADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVD---- 243
            .....:..|.|:::|.|||:||.|.|.|..|||.|:..:|:|||: ...:||.::||:.::    
Mouse   214 KKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKTQILELPH-TGNISMLLLLPDEIEDAST 277

  Fly   244 GLRKLKEKVGFIDYH-------LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVF-KPSADLNG 300
            ||..|:.::.|.:::       |::..|.|.:||||:....:||.|.:::|:.|.| |..|:.:|
Mouse   278 GLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELKSILQSMGMEDAFNKGKANFSG 342

  Fly   301 LVLESGAKIDKIVQKAFLKIDEKGGEASAATG-VLTRRKKSIDNLIQPPMEFIADHPFFYVIHD- 363
            :...:...:.::..:|.:.:.|:|..|:..|| |:|.|..      ....:|:|||||.:.|.| 
Mouse   343 MSERNDLFLSEVFHQASVDVTEEGTVAAGGTGAVMTGRTG------HGGPQFVADHPFLFFIMDK 401

  Fly   364 -NKVIYFQGHIVEP 376
             ...|.|.|....|
Mouse   402 ITHTILFVGRFSSP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 110/399 (28%)
Serpinb2NP_001167641.1 SERPIN 4..415 CDD:294093 110/402 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 216 1.000 Domainoid score I2692
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 217 1.000 Inparanoid score I3582
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.980

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