Protein Alignment Spn28B and srp-1

DIOPT Version :9

• Sequence 1: NP_001260209.1
• Gene: Spn28B / 34035
• FlyBaseID: FBgn0083141
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_503315.1
• Gene: srp-1 / 178585
• WormBaseID: WBGene00005642
• Length: 366
• Species: Caenorhabditis elegans
• Alignment Length: 350
• Identity: 89/350 - (25%)
• Similarity: 171/350 - (48%)
• Gaps: 36/350 - (10%)

  Fly    35 IYSPISAEIIMSMVYMASGGKTFEELRNVL-------KFSENKTLVANNYRSLLSDLKRRETFII 92
            ::||:|..:.:::|::.:.|.|..::||.:       :|.|:.:.:.....|.::|:   ||.|
 Worm    32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDV---ETLI- 92

  Fly    93 LHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIVLPK 157
               |||::|:.:..:...|....|:.:.|:..:|.......|:.|:|.:|...|:|.|.:::.|
 Worm    93 ---ANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKP- 153

  Fly   158 DFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSA--NEIIPVKMMTLSASLLSGYIDDIDA 220
            |...|..|.|:|||:|:|.|...|  .:...::|.:||  |.::|:...|....    |..|.:.
 Worm   154 DNLKDVDAILINAIFFQGDWRRKF--GEPAESNFSISATENRLVPMLRETRDYF----YNKDDEW 212

  Fly   221 KIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYH-----LEKKSVNVKLPKFKIESKAQLK 280
            ::|.:|:.:.:....|.||.....|.:..:.:....:|     :.::.:.:..||||::.|..||
 Worm   213 QVIGIPFKDKSAWFAIFLPTRRFALAENLKSLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLK 277

  Fly   281 GIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAAT-GVLTRRKKSIDNL 344
            ......|:.::|...|||:|  :..|.::.....:|.:::|:.|..|:||| ..:.....|.|.
 Worm   278 TALAKFGLAELFTEQADLSG--IGPGLQLASATHQALIEVDQVGTRAAAATEAKIFFTSASSDE- 339

  Fly   345 IQPPMEFIADHPF-FYVIHDNKVIY 368
               |:....|||| |.:|.||..::
 Worm   340 ---PLHIRVDHPFLFAIIKDNSPLF 361

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spn28B	NP_001260209.1	SERPIN	17..373	CDD:238101	89/349 (26%)
srp-1	NP_503315.1	serpinL_nematode	11..365	CDD:381047	89/349 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H76659
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG57242
OrthoDB	1	1.010	-	-		D556621at33208
OrthoFinder	1	1.000	-	-		FOG0000050
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100128
Panther	1	1.100	-	-	O	PTHR11461
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X28
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.930