DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpina10

DIOPT Version :10

Sequence 1:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_598301.2 Gene:Serpina10 / 171154 RGDID:621220 Length:436 Species:Rattus norvegicus


Alignment Length:424 Identity:96/424 - (22%)
Similarity:179/424 - (42%) Gaps:80/424 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVESGFWEDF----------YRILASQNAKR-------------------NLIYSPISAEI 43
            |::...|:..||::          |.:.|||....                   |:|:||....:
  Rat    35 LVSQDYENQTWEEYEWADPRDDNEYWLRASQQLSNETSSFGFSLLRKISMRHDGNVIFSPFGLSV 99

  Fly    44 IMSMVYMASGGKTFEELRNVLK---FSENKTLVANNYRSLLSDLKR-RETF-----IILHMANRI 99
            .|..:.:.:.|:|..::.|.|.   .|:...|:      |.:..|| :|||     :.|...:..
  Rat   100 AMVNLMLGAKGETKVQVENGLNLQALSQAGPLI------LPALFKRVKETFSSNKKLGLTQGSFA 158

  Fly   100 YVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTRGMIRNIVLPK---DFNS 161
            :::|.:.:...:..|:...|..:.......:...|..::|.:|...|.|.|     ||   :.|.
  Rat   159 FIHKDFEIKKTYFNLSTMYFDTEYVPTNFRNSSQARGLMNHYINKETEGKI-----PKLFDEINP 218

  Fly   162 DTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELP 226
            :|...||:.|.|||:||..|....|....|::...:.:.|.||....:..|.:.......|::||
  Rat   219 ETKLILVDYILFKGKWLTPFDPIFTEADTFHLDKYKAVKVPMMYREGNFASTFDKKFRCHILKLP 283

  Fly   227 YWNSTLSMRIILPNSVDGLRKLKEKVGFIDY-----------HLEKKSVNVKLPKFKIESKAQLK 280
            |..:...:.:::..|.|.|       ...||           .::.:.:.|..||||:..:.::.
  Rat   284 YQGNATMLVVLMEKSGDHL-------ALEDYLTTDLVEMWLQDMKTRKMEVFFPKFKLNQRYEMH 341

  Fly   281 GIFENLGILDVFKPSADLNGL-VLESGAKIDKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNL 344
            .:.:.:||..:|..||||:.| .:....::.|:||::.|::||:|.|..:.|      ...|...
  Rat   342 ELLKQVGIRRIFSTSADLSELSAVARNLQVSKVVQQSVLEVDERGTEVVSGT------VSEITAY 400

  Fly   345 IQPPMEFIADHPFFYVIHD--NKVIYFQGHIVEP 376
            ..||: ...|.||.::|::  ::::.|.|.:|.|
  Rat   401 CMPPV-IKVDRPFHFIIYEEMSQMLLFLGRVVNP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 94/418 (22%)
Serpina10NP_598301.2 serpinA10_PZI 56..434 CDD:381011 92/403 (23%)
Heparin-binding. /evidence=ECO:0000250 128..145 6/22 (27%)

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