DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and Serpini2

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:394 Identity:106/394 - (26%)
Similarity:201/394 - (51%) Gaps:32/394 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YLLLLATSVES--------GFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELR 61
            :||.|:.|..|        .|..|.|:.::..| |.|:|:||:...:::.||.:.:.||..:::.
  Rat     9 FLLFLSGSQTSRTMDQKNAEFAVDLYKAISLSN-KNNVIFSPLGTTVLLGMVQLGAKGKAQQQIM 72

  Fly    62 NVLKFSENKTLVANNY---RSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKA 123
            ..|:.  .||.....:   :||.|.:.:::.....::|:.:|:.:.:.:...:....::.|::..
  Rat    73 QTLRM--QKTSTGEEFSVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKESYLHSNKEFFQSAT 135

  Fly   124 KSIRLDDPVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHI 188
            |.:...|..:::..:::|:.::|.|.|:|:...:||...|...|||||||||.|...|:.:.|.:
  Rat   136 KLVDFLDAKTSAQAISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEM 200

  Fly   189 ADFYVSANEIIPVKMMTLSASLLSGYIDD--IDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEK 251
            .||.......:.:.||........||..:  :..:::||||.....|:.|:||.....:.:::::
  Rat   201 TDFSKKDGSTVKIPMMKALLRAKYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNIEEVEKQ 265

  Fly   252 V-------GFIDYHLEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKI 309
            |       .|.:.|.|:  |.|.||:||||.|...|....:|.:.::|....||:|:...|...:
  Rat   266 VTARHVQKWFSELHEEE--VEVSLPRFKIEQKLDFKEALFSLNVTEIFSGGCDLSGITDSSELYV 328

  Fly   310 DKIVQKAFLKIDEKGGEASAATGVLTRRKKSIDNLIQPPMEFIADHPFFYVIH--DNKVIYFQGH 372
            .:.:||.|.:|:|.|.||:|:||:   ...:|.:|.|  .:|:|:|||.:::.  ..:.|.|.|.
  Rat   329 SRAMQKVFFEINEDGSEAAASTGI---NIPAIMSLTQ--TQFLANHPFLFIMKHIQTESILFMGK 388

  Fly   373 IVEP 376
            :.:|
  Rat   389 VTDP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 100/369 (27%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 101/380 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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