DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28B and serpine3

DIOPT Version :9

Sequence 1:NP_001260209.1 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster
Sequence 2:XP_031752090.1 Gene:serpine3 / 100497951 XenbaseID:XB-GENE-6044687 Length:450 Species:Xenopus tropicalis


Alignment Length:424 Identity:93/424 - (21%)
Similarity:167/424 - (39%) Gaps:86/424 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSENKTLVANNYRSLLSDLKR 86
            |:.|.:...:.||:.||.|....:.::...:.|.||.::.::|.::.:...|.:...::.|.|..
 Frog    42 YQTLVNMENRTNLVVSPSSVASSLGLLQFGAQGNTFAQMESILGYNVHDVTVQDFMETMFSGLAN 106

  Fly    87 RETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSASAIVNSWILNRTRGMIR 151
            ......:|:|..:::.......|.|.|.|.....:..:.....:|...:..:|.|:.:.|.|...
 Frog   107 SSQGTAIHLACALFIQTGTTFSPRFIQYAALWANSSLQLANFSEPGMTATQINQWVSSNTGGEYP 171

  Fly   152 NIVLP----------------------------------------------KDFNSDTSAF---- 166
            ..::|                                              .:|.   ..|    
 Frog   172 QYLVPISCPYAHEAHYILLYLARLRVYKLYLQLIIICQMALTCGIQPLVPCDEFG---PVFPQIA 233

  Fly   167 LVNAIYFKGQWLYNFKADQTHIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAK---IIELPYW 228
            ||:.:|||..|...|....|....|..:....|.|.||..:|.:..|..:....|   ::||||.
 Frog   234 LVSTMYFKSTWKTKFSFTDTQTLPFISTDGSTIKVPMMHQTADVNYGQFETPSLKRFTVVELPYI 298

  Fly   229 NSTLSMRIILPNSVDGLRKLKEKVGFIDYHLEKKS------------VNVKLPKFKIESKAQLKG 281
            .:|:||.::.|:.      ....:..|:.:|..||            ::|.||:|:::|.:.|:.
 Frog   299 GNTVSMFVVRPSD------RNTPLSCIEANLTSKSMAQWANSMKRMKMDVFLPRFRLQSHSNLRN 357

  Fly   282 IFENLGILDVFKP-SADLNGLVLESGAKIDKIVQKAFLKIDEKGGEASAATG-VLTRRKKSIDNL 344
            :...||..|:|.| .|:..|:..:||..|.:.:.||.:::.|.|..||..|. ||.:|.:.    
 Frog   358 VLPALGATDLFDPWKANFKGISEQSGLYISQAIHKAEIEVAEGGTRASGVTAMVLLKRSRM---- 418

  Fly   345 IQPPMEFIADHPFFYVIH--DNKVIYFQGHIVEP 376
               |: |.||.|||:.:.  .:..|.|.|.:..|
 Frog   419 ---PV-FKADRPFFFFLRQASSGSILFIGRVTNP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28BNP_001260209.1 SERPIN 17..373 CDD:238101 92/419 (22%)
serpine3XP_031752090.1 serpinE3 22..448 CDD:381040 92/422 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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