DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and TSC2

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_011520940.2 Gene:TSC2 / 7249 HGNCID:12363 Length:1879 Species:Homo sapiens


Alignment Length:802 Identity:177/802 - (22%)
Similarity:267/802 - (33%) Gaps:228/802 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GHPIIVGSSEISLAPSS----AASSPKP-LHRMIKYWRNSSG-KIPGLRK----------SESFA 59
            ||.:.||:.::   |:|    :|:||.| .....|..:.|:| ::|...|          ::.:|
Human  1188 GHGLRVGALDV---PASQFLGSATSPGPRTAPAAKPEKASAGTRVPVQEKTNLAAYVPLLTQGWA 1249

  Fly    60 E--YRRHSSNSATISGGSGGRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMANTQKQQP 122
            |  .||.:.|::.:.......|..||    ....:.::...|..|..|..:.............|
Human  1250 EILVRRPTGNTSWLMSLENPLSPFSS----DINNMPLQELSNALMAAERFKEHRDTALYKSLSVP 1310

  Fly   123 AGGGSGSGSVTHSPERLRGATTATQDLFELLERVQCSRLDDQRCVLPAYFSQNHHRGSNA----- 182
            |      .|....|...|..|.|:   |..|.:..|.....:........||....|..|     
Human  1311 A------ASTAKPPPLPRSNTVAS---FSSLYQSSCQGQLHRSVSWAGIASQREAVGCRAPLCLI 1366

  Fly   183 SEERVPQPHSPHDSHAHPHNGGLQHSGSRATL-RHSMNHSSSSTVSGSACSSTPASPQLSG---- 242
            ....|.:..||.:........||:...:...: |.:..:|.||:||.....|..|. :|.|    
Human  1367 DSAVVMEEGSPGEVPVLVEPPGLEDVEAALGMDRRTDAYSRSSSVSSQEEKSLHAE-ELVGRGIP 1430

  Fly   243 ---VVSASGCQLLSNGHHYQSQSSVSSNSSIVSAIPASQRLLEEALAKPAP-------YPMILLP 297
               |||:.|.:...:.....||....|:||     |..| .|::.|..|..       .|.:...
Human  1431 IERVVSSEGGRPSVDLSFQPSQPLSKSSSS-----PELQ-TLQDILGDPGDKADVGRLSPEVKAR 1489

  Fly   298 LHGGYWMDGTE---HECGYDARGNP--LLPQTTWMAK-------FETDDTAKCYRRFYAARE--- 347
            ...| .:||..   ...|.|:||.|  .||.::..:.       :...|:|...|.....|:   
Human  1490 SQSG-TLDGESAAWSASGEDSRGQPEGPLPSSSPRSPSGLRPRGYTISDSAPSRRGKRVERDALK 1553

  Fly   348 ------------------------HSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMH 388
                                    ||...| ||...||||.                        
Human  1554 SRATASNAEKVPGINPSFVFLQLYHSPFFG-DESNKPILLP------------------------ 1593

  Fly   389 ELLPVSCLLPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQ 453
                                 ||:.:.|..:.:|     ..|..||.|      |..|||...||
Human  1594 ---------------------NESQSFERSVQLL-----DQIPSYDTH------KIAVLYVGEGQ 1626

  Fly   454 TTEE-ELFGNQQTSPAFDEFLDVLGQRIRLKD---HKGYRGGLDIQNGHTGDTAVYEVFKEREIM 514
            :..| .:..|:..|..:.|||..||:.|.|||   .|.|.||||:    .|:...:......:||
Human  1627 SNSELAILSNEHGSYRYTEFLTGLGRLIELKDCQPDKVYLGGLDV----CGEDGQFTYCWHDDIM 1687

  Fly   515 ---FHVSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNT 576
               ||::||:|..:.|..:..:|||:|||.|:||:.::...|....|...|....::|.|::   
Human  1688 QAVFHIATLMPTKDVDKHRCDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIVTPLD--- 1749

  Fly   577 PHTRYK---VSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFA------ 632
                |:   ||:..|.|:                :...:..:.|:::..|..:.|.:.|      
Human  1750 ----YECNLVSLQCRKDM----------------EGLVDTSVAKIVSDRNLPFVARQMALHANMA 1794

  Fly   633 ----------------KLEQRTR--TSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAES 679
                            |...|.|  ..|.|.:|||........   .|....:.|..|....||.
Human  1795 SQVHHSRSNPTDIYPSKWIARLRHIKRLRQRICEEAAYSNPSL---PLVHPPSHSKAPAQTPAEP 1856

  Fly   680 GSGGNAGSRFIDTVKKALIMRV 701
            ..|...|.|      |.||..|
Human  1857 TPGYEVGQR------KRLISSV 1872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 3/20 (15%)
Rap_GAP 460..639 CDD:280332 51/209 (24%)
TSC2XP_011520940.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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