DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and Ralgapa1

DIOPT Version :10

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_030102685.1 Gene:Ralgapa1 / 56784 MGIID:1931050 Length:2586 Species:Mus musculus


Alignment Length:674 Identity:152/674 - (22%)
Similarity:249/674 - (36%) Gaps:178/674 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 PAYF--------SQNHHRGSNASEERVPQP-HSP---HDSHAHP-------HNGGLQHSGSRATL 214
            |.||        |.::....:....:.|:| |||   ..|...|       ...||....:|..:
Mouse  1948 PKYFPISLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQQGLISIAARTVI 2012

  Fly   215 RHSMNHSSSSTVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSVS-------------- 265
            .|.:||.....:||.     ||      ::::..|:  ::.:||...:.:|              
Mouse  2013 THLVNHLGHYPMSGG-----PA------MLTSQVCE--NHDNHYSESTELSPELFESPNIQFFVL 2064

  Fly   266 SNSSIVSAIPASQRLLEEAL----------AKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPL 320
            :|:::||.|   |...||::          :..:...:|:..|.|.|..|..      ...|.|:
Mouse  2065 NNTTLVSCI---QIRSEESMPGGGLAAGLVSANSNVRIIVRDLSGKYSWDSA------ILYGPPI 2120

  Fly   321 ---LPQTTW-------MAKFETDDTAKCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEH 375
               ||:.|.       ..|.|...|:.......|.::     ||..||.....::.|.:...:|.
Mouse  2121 VSGLPEPTSFILSMSDQEKPEEPPTSNECLEDIAVKD-----GLSLQLRRFRETVPTWSTIREEE 2180

  Fly   376 ---MRILMRLRTGTMHELLP---VSCLLPQPSPAKMA--------------HTLNENITVEHFMP 420
               ..:|..|.| |..|.|.   :|..:|.|.|..::              :|..:....:||..
Mouse  2181 DVLDELLQYLGT-TSPECLQRTGISLNVPAPQPLCISEKQENDVINAILKQYTEEKEFVEKHFND 2244

  Fly   421 ILCPKASQ------------------LISV-----YDE----HVLVSH----------------- 441
             |..|||:                  |:|:     :|:    |:|..:                 
Mouse  2245 -LNMKASEQDEPTPQKPQSAFYYCRLLLSILGMNSWDKRRSFHLLKKNEKLLRELRNLDSRQCRE 2308

  Fly   442 -FKFGVLYQRYGQTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVY 505
             .|..|.|...||..:..:..|...|.|:::|:..||..:.|.:|.|:.|||. :|..||.|..|
Mouse  2309 THKIAVFYVAEGQEDKYSILTNIGGSQAYEDFVAGLGWEVNLTNHCGFMGGLQ-KNRSTGLTTPY 2372

  Fly   506 EVFKEREIMFHVSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQ 570
            ......|::|||||.:| ::.|....::.||:|||.|.||:.|....:...:|.:.|....||:.
Mouse  2373 FATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHIVWSEHTRDYRRGIIPTEFGDVLIVIY 2436

  Fly   571 PIEPNTPHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKA----EKF 631
            |::    :..:.:.:..:.:||||||......|  .|:.....:.:..|||..|....    :.|
Mouse  2437 PMK----NHMFSIQIMKKPEVPFFGPLFDGAIV--NGKVLPIMVRSTAINASRALKSLIPLYQNF 2495

  Fly   632 AKLEQRTRTSLLQNLCEELREKT--RDFLGTDLSQT--------SAGS-----PTPETPKAESGS 681
              .|:|.|  .||.:.:...|.|  .||.....|..        :.||     |:...|.|:...
Mouse  2496 --YEERAR--YLQTIVQHHLEPTTFEDFAAQVFSPAPYHHFPADAVGSYPEIPPSDAAPAAQVDG 2556

  Fly   682 GGNAGSRFIDTVKKALIMRVRSQS 705
            ...|......|.|..:.|::|..|
Mouse  2557 ADLASPMSPRTSKSRMSMKLRRSS 2580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:460481
Rap_GAP 460..639 CDD:460463 54/182 (30%)
Ralgapa1XP_030102685.1 RALGAPB_N 549..677 CDD:466561
Rap_GAP 2328..2501 CDD:460463 54/182 (30%)
Blue background indicates that the domain is not in the aligned region.

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