DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and sipa1l1

DIOPT Version :10

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_001268721.1 Gene:sipa1l1 / 562521 ZFINID:ZDB-GENE-030131-9909 Length:1794 Species:Danio rerio


Alignment Length:943 Identity:263/943 - (27%)
Similarity:380/943 - (40%) Gaps:215/943 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GSSEISLAPSSAASSPKPLHRMIKYWRNSSGKIPGL----RKSESFA----EYRRHSSNSATISG 73
            |.....|:|.....||:...|.|:...||...|..|    .:..||:    .:|.:.|.|:....
Zfish   152 GKDNRFLSPDGYLGSPRKGMRRIRQRSNSDITISELDGDGSEGWSFSGWTPMHREYGSTSSIDKH 216

  Fly    74 GSGGRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMANTQKQQPAGGGSGSGSV-----T 133
            |..|.|.....:.......:..| ...:.|:|.|...|...|......|.|...||.:.     .
Zfish   217 GVSGESFFDMLKGYTTDAPDQRS-PAPEKLSELLTVAHKQTALDLPDGPLGPPRGSPASRLKERE 280

  Fly   134 HSPERLRGATTATQDLFELLERVQCSRLDDQRCVLPAYFSQNHHRGSNASEER------VPQPHS 192
            ...:|...:.|..:.:|..|..|:... |..|.            ||:|.:.:      .|:|..
Zfish   281 KQMKRRSKSETGGESIFRKLRSVKAEG-DSSRA------------GSDAEDGKSDDLGPPPKPWV 332

  Fly   193 PHDSHAH--------PHNGGLQH-----------SGSRATLRHSMNHSS--SSTVS---GSACSS 233
            .....||        ..|..:|.           :|:.|....|.:::|  |||.|   ||.|.|
Zfish   333 CQKGFAHFDVQSILFDLNEVVQSRQSAAKRKNTTTGASAAAAASASNTSSLSSTQSGAYGSPCGS 397

  Fly   234 TPASPQLSGVVSASG----------CQLLSN--GHHYQSQSSVSSNSSIVSAIPASQRLLEEALA 286
            ........|....||          |....|  |...:...|.|...||.|...:|.| .||...
Zfish   398 QEELSVKDGPSLDSGDDKSNDLVLSCPCFRNEIGGEGERNISPSKQGSIGSGASSSSR-DEEGSP 461

  Fly   287 KPAP--------YPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTAKCYRRFY 343
            :.||        ..::..|..|    ....|:.|   :.|.|         ...|..|..||:.:
Zfish   462 ERAPNTHFSNAGVAVLEAPKDG----KSLHHDRG---KSNIL---------EHVDLGAYYYRKNF 510

  Fly   344 AAREHSNLIGLDEQLGPILLSIKTENVA-NQEH-----MRILMRLRTGTMHELLPV-SCLLPQPS 401
            ..|||.|.:|:||.|||:.:||:.|.:. ::||     .||:.|     ..||..: ..:|....
Zfish   511 YLREHWNYLGVDETLGPVAVSIRREKLEDHKEHGQQYNYRIIFR-----TSELTTIRGSILEDAV 570

  Fly   402 PAKMAHTLNENI----TVEHFMPIL---C-------PKASQLISVYDEHVLVSHFKFGVLYQRYG 452
            |:...|.|...:    .:::.:|.|   |       ||.::.:...||..|....|.||:|.:.|
Zfish   571 PSTSKHGLARGLPLKEVLDYLVPELNAHCLRLALNTPKVTEQLMKLDEQGLSFQLKVGVMYCQAG 635

  Fly   453 QTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHV 517
            |::|||::.|:...||.:|||.:||:|:|||....||..||.:...||..::|..||:.||||||
Zfish   636 QSSEEEMYNNETAGPALEEFLQLLGERVRLKGFSKYRAQLDTKTDSTGTHSLYTTFKDYEIMFHV 700

  Fly   518 STLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNT-PFSPDMIASHFLHAFIVVQPIEPNTPHTRY 581
            ||:||:|..:.|||.||||||||||.|||||... ||||..|.|||.|.|:||:.:.|.|.:..|
Zfish   701 STMLPYTPNNKQQLLRKRHIGNDIVTIVFQEPGAKPFSPKNIRSHFQHVFVVVRALNPCTENACY 765

  Fly   582 KVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNL 646
            :|:|....|||.|||.:|..|.|.|...|::|:|.|:||||||.:|::||..:..|||...|::|
Zfish   766 RVAVARSRDVPAFGPPIPEDATFPKSTVFRDFLLAKVINAENAAHKSDKFRAMATRTRQEYLRDL 830

  Fly   647 CE---------------------ELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGG------- 683
            .|                     :.:||||.:||.:|  .|.|:.|......:.|:||       
Zfish   831 AERHVTSTPIDPSGKFPFISLAHKRKEKTRPYLGAEL--RSPGAITWPVYAEDHGAGGELEALLA 893

  Fly   684 --NAGSRFIDTVKKALIMRVRSQSVDTGNGHGPGQTDKFSVNTKLGTLNSKKETHPEMQTPNLNT 746
              |.....:|...||::.....:.|               :...||:..|.|..:...:..:|  
Zfish   894 ISNDFLVLVDPEAKAVVFNCAVRDV---------------IGWTLGSPASMKIYYERGENISL-- 941

  Fly   747 CSRTASKSSSKSKSSNESTSSSPDITSR-------------QANNNNTNSIGGHLPQNGTGGGVV 798
                        :|.|.:|....::..|             ....|....:|.|:...|     :
Zfish   942 ------------RSMNNNTEDFREVVKRLEHLTKGCETSEMTLRRNGLGQLGFHVNYEG-----I 989

  Fly   799 AAAVS----AAQNGV-----------VAVATMS 816
            .|.|.    |.|.|:           |||||:|
Zfish   990 VAEVEPYGYAWQAGLRQGSRLVEICKVAVATLS 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:460481 5/20 (25%)
Rap_GAP 460..639 CDD:460463 91/179 (51%)
sipa1l1NP_001268721.1 Rap_GAP 643..823 CDD:460463 91/179 (51%)
PDZ_SIPA1-like 969..1041 CDD:467227 15/59 (25%)
PHA03307 1183..>1440 CDD:223039
SPAR_C 1496..1739 CDD:463383
ZapB 1730..1782 CDD:428718
Blue background indicates that the domain is not in the aligned region.

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