DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and rap1gap2a

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_021337099.1 Gene:rap1gap2a / 561339 ZFINID:ZDB-GENE-061013-179 Length:843 Species:Danio rerio


Alignment Length:817 Identity:282/817 - (34%)
Similarity:401/817 - (49%) Gaps:151/817 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 GLQHSGSRATLRHSMNHSSSS--TVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSVSS 266
            ||.|...|...|.........  |:|.......|.||..:...:....:........|...:..:
Zfish    58 GLLHKSRRQKEREREKERKQELLTISSVPLGECPPSPPRTAPPTMKSAEFFDMLERMQIPKTEET 122

  Fly   267 NSSIVSAIPASQRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECG---------YDARGNPLLP 322
            .......||..:  :|:.|.|..|||.::||..||||::..|...|         .:...:.|.|
Zfish   123 KKYKDDYIPYPR--IEDVLEKGGPYPQVILPQFGGYWIEDPEAPVGTPTSSDSSFCEEENDDLSP 185

  Fly   323 Q-----TTWMAKFETDDTAKCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRL 382
            .     ..:..:.|.:.|::.||:.:..:||.|.......:|.:::|:|.|:...||.:||::|.
Zfish   186 SGGGGGGGFGYRMECNSTSRAYRKHFLGKEHMNYYCTASSMGHLIMSLKYEDADGQESLRIMLRS 250

  Fly   383 RTGTMHELLPVSCLLPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVL 447
            :|.|:||.:|:..|:..||..::|..|.:::|...|.|:|.|:|||||..:|||.:.:.|||||:
Zfish   251 KTKTLHERIPLEGLIHLPSIPQIAKLLCDDVTGLKFNPVLYPRASQLIVSFDEHEVNNTFKFGVI 315

  Fly   448 YQRYGQTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKERE 512
            ||::|||:|||||||.:.:|||.|||.|||..|.|:|.||:|||||:.:|.||..:||..|::||
Zfish   316 YQKFGQTSEEELFGNNEETPAFAEFLSVLGDNIELQDFKGFRGGLDVSHGQTGSESVYTTFRQRE 380

  Fly   513 IMFHVSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTP 577
            |||||||.||.||||.|||||||||||||||.:|||..|||.||||||:||||:|:||...|.|.
Zfish   381 IMFHVSTKLPFTEGDIQQLQRKRHIGNDIVAAIFQEEPTPFVPDMIASNFLHAYILVQAENPCTD 445

  Fly   578 HTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSL 642
            ||.||||||||:|||.|||.||||:||:||.||:|:.|||||||||||||::||||||:|||.:|
Zfish   446 HTTYKVSVTAREDVPPFGPPLPNPSVFKKGPEFREYFLTKLINAENACYKSDKFAKLEERTRAAL 510

  Fly   643 LQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVD 707
            |.||.:||..:|:..:|       .||.|.|......|.||     .:::.|:|  |||||.|::
Zfish   511 LDNLHDELHRQTQATVG-------LGSATDEEKLENGGHGG-----LLESFKRA--MRVRSHSME 561

  Fly   708 TGNGH---GPG------------------------------------------------------ 715
            |...|   .||                                                      
Zfish   562 TMVTHKHKSPGAVAGVPSSLSGGGLQQNSMECTKSTFTPPVLSAKSPLKSPVKRRSGLFPRLHSS 626

  Fly   716 --------------QTDKFSVNTKLGTLNSKKETHPEMQTPN-------LNTCSRTASKSSSKSK 759
                          :|:.|..:.::.:..|...:.||: .||       |..||..|:.|.|:|.
Zfish   627 TESPTEKHPTRSDQKTEVFPASQEVRSETSSNPSSPEI-CPNKERPFVKLKECSGRANISISRSS 690

  Fly   760 SSNESTSSSPDITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSL 824
            ||..|.||    |:.:.:......:..| |...:.....:.:|.:..:|...:...|.|.:..:.
Zfish   691 SSTSSFSS----TAGEGDALEELEMISH-PSTASSVYCPSLSVESQSSGTPLIMCRSPTGEIHAN 750

  Fly   825 NSVDLDPMMAHLDGGATYIDSDTGLE-----------SMSSAEATTKACSLCLDGVQSTIMGS-- 876
            |         :.:.|.:.....:.|:           |:.|:|....:.||.|....:...||  
Zfish   751 N---------NNNNGKSKTSPRSNLKFRFDKLSHSTVSVVSSENLQSSGSLGLTENTAGTKGSDF 806

  Fly   877 -------------SPSNETIVKIENLRQEVTRLKCDK 900
                         |.:|.|:..:::..|..|.||..|
Zfish   807 EWIFIDWKKKGPFSQANATVTTVQHNTQLNTMLKTQK 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368
Rap_GAP 460..639 CDD:280332 126/178 (71%)
rap1gap2aXP_021337099.1 Rap_GAP 328..507 CDD:307998 126/178 (71%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586372
Domainoid 1 1.000 267 1.000 Domainoid score I1827
eggNOG 1 0.900 - - E1_KOG3686
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 465 1.000 Inparanoid score I1513
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D163377at33208
OrthoFinder 1 1.000 - - FOG0002359
OrthoInspector 1 1.000 - - otm25518
orthoMCL 1 0.900 - - OOG6_105084
Panther 1 1.100 - - O PTHR15711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 1 1.000 - - X1790
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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