DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and CG5521

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_001163748.1 Gene:CG5521 / 43242 FlyBaseID:FBgn0039466 Length:1964 Species:Drosophila melanogaster


Alignment Length:909 Identity:191/909 - (21%)
Similarity:296/909 - (32%) Gaps:332/909 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVDH-GH-PIIVGSSEISLAPSSAASSPKPLHRMIKYWRNSSGKIPGLRKSESFAEYRRHSSNSA 69
            ||.| || |:.:|:|.:|                                  |..|.:....|:|
  Fly  1315 LVTHIGHFPMGIGASRLS----------------------------------SMVEEQDDIGNAA 1345

  Fly    70 TISGGSGGRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMANTQK-----QQPA----GG 125
                 .||:..|   |:...:...:.|.:|:.:          ||.|:..     :.|.    ||
  Fly  1346 -----YGGQVET---RRDSVELPSVVSAQNMQL----------FMLNSGLVASFIELPTLKLPGG 1392

  Fly   126 GSGSGSVTHSPERLRGATTATQDLFELLERVQCSRLDDQRC----VLPAYFSQNHHRGSNASEER 186
            |..:|.||...:                .||....|:.:.|    :|       :....||.|  
  Fly  1393 GITAGLVTADKQ----------------VRVLMRDLNGKACWDASIL-------YSEPRNAEE-- 1432

  Fly   187 VPQPHSPHDSHAHP----HNGGLQHSGS-RATLRHS------------------------MNHSS 222
             |...:|...|:.|    ....:.|:.| |.||||.                        :.|:|
  Fly  1433 -PPKTTPKIQHSQPLDSMATSMVTHTPSPRHTLRHRPAGVLPLAKDMAPDLDQLDDMLAYIGHTS 1496

  Fly   223 SSTVSGSACS-STPASPQLSGVVSASGCQLLSNGHHYQSQSSVSSNSSIVSAIPASQRLLEEAL- 285
            ...|:.:... :.|.:..|||...|....::.|                       |||||:.. 
  Fly  1497 PECVAPTVSQLNAPTASPLSGNQEAQAISVILN-----------------------QRLLEQEFV 1538

  Fly   286 --AKPAPYPMILLPLHGGYWMDGTEHECGYDARGNP---LLPQTTWMAKFETDDTAKCYRRFYAA 345
              :..||.|.:             .|.....:...|   .|..||  |.|::..| :....|...
  Fly  1539 THSTQAPSPAL-------------RHASSNSSLQQPDQRSLHSTT--ASFDSLPT-RTEMPFQYC 1587

  Fly   346 R---EHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCLLPQPSPAKMAH 407
            |   .|..|.|.:.:....||         |...:::..||                        
  Fly  1588 RLLFSHLGLAGWERRSRTHLL---------QRSEKLMRELR------------------------ 1619

  Fly   408 TLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDEF 472
                |:.::.     |.:              :| |..|:|...||..:..:..|...|..::.|
  Fly  1620 ----NVDLQK-----CRE--------------TH-KMAVIYVAAGQEDKGSILRNTSGSSTYEMF 1660

  Fly   473 LDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKRHI 537
            :..||..|.|:.|.|:.|||..|.  .|.||.|......|:::||:|.:| ::.....|.:.||:
  Fly  1661 VSALGWEIDLETHNGFLGGLPRQG--CGATAPYYATPFLEVVYHVATRMP-SDSSEAMLLKTRHL 1722

  Fly   538 GNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNPA 602
            |||.|.||:.|.|..:..|::.:.|....|||.|:.    :..::|:|..:.:||:||| |.|.:
  Fly  1723 GNDEVHIVWSEHNRDYRRDILPTEFCDVLIVVYPLR----NGLFRVTVNRKPEVPWFGP-LANES 1782

  Fly   603 VFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNLCEELREKTRDFLGTDLSQTSA 667
            |. .|......|....|||...           :|....|.|...|| |.::.|         |.
  Fly  1783 VV-SGACLATLIRATAINASRT-----------KRAALPLYQQFYEE-RNRSLD---------SV 1825

  Fly   668 GSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVDTGNGHGPGQTDKFSVNTKLGTLNSK 732
            .|...|:...|     :..||..:.:                    |..|        ||||   
  Fly  1826 SSRYKESTTFE-----DFASRIYNPM--------------------PLST--------LGTL--- 1854

  Fly   733 KETHPEMQTPNLNTCSRTASKSSSKSKSSNESTSSSPDITSRQANNNNTNSIGGHLPQNGTGGGV 797
                                      :.||.|:|::| :.|...::|.. |:.|.:..:...|.:
  Fly  1855 --------------------------RESNASSSAAP-LASALLDHNRA-SVKGWVQASIDSGPI 1891

  Fly   798 --VAAAVSAAQNGVVAVAT-MSETSD------DSSLNSVDLDPMMAHLD-GGATYIDSDTGLES 851
              :|.:.||.....:..|| ||..|.      .:...||.....:.|:. ||......||..||
  Fly  1892 MGIAPSASAGSTAAMEAATGMSSASPRGPRKLGAPFKSVTKKHSLQHIAVGGGAGAGGDTPPES 1955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 4/24 (17%)
Rap_GAP 460..639 CDD:280332 55/178 (31%)
CG5521NP_001163748.1 Rap_GAP 1648..1820 CDD:280332 60/192 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3686
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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