DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and Rap1gap2

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_006533687.1 Gene:Rap1gap2 / 380711 MGIID:3028623 Length:790 Species:Mus musculus


Alignment Length:881 Identity:296/881 - (33%)
Similarity:417/881 - (47%) Gaps:226/881 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GGRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMANTQKQQPAGGGSGSGSVT-----HS 135
            |.|.||.:                  :|..|.|:|.  :||            |..||     .|
Mouse    72 GDRQSTPT------------------LLWRPARKQE--LAN------------SSDVTLPDRPLS 104

  Fly   136 PERLRGATTATQDLFELLERVQCSRLDDQRCVLPAYFSQNHHRGSNASEERVPQPHSPHDSHAHP 200
            |......|..:.:.||:||::|..:|::||                      |.|....|.:   
Mouse   105 PPLTAPPTMKSAEFFEMLEKMQGIKLEEQR----------------------PGPQKNKDDY--- 144

  Fly   201 HNGGLQHSGSRATLRHSMNHSSSSTVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSVS 265
                                                                             
Mouse   145 ----------------------------------------------------------------- 144

  Fly   266 SNSSIVSAIPASQRLLEEALAKPAPYPMILLPLHGGYWMD-----GTEHECG---YDARGNPLLP 322
                    ||...  ::|.:.|..|||:|:||..||||::     ||....|   |:......|.
Mouse   145 --------IPYPS--IDEVVEKGGPYPLIILPQFGGYWIEDPENVGTPTSLGSSVYEEEEEDSLS 199

  Fly   323 QTTWMAKFETDDTAKCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTM 387
            ..|:..|.|....|:.|||.:..::|.|.......||.::||||.|.....|::||::|.:..|:
Mouse   200 PNTFGYKLECRGEARAYRRHFLGKDHLNFYCTGSSLGNLILSIKCEEAEGMEYLRIILRSKLKTV 264

  Fly   388 HELLPVSCLLPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYG 452
            ||.:|::.|...||..::|....::.....|.|:|.|||||:|..||||.:.:.|||||:||:..
Mouse   265 HERIPLAGLSKLPSVPQIAKAFCDDAVGLKFNPVLYPKASQMIVSYDEHDVNNTFKFGVIYQKAR 329

  Fly   453 QTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHV 517
            ||.|||||||.:.||||.||||:||..|.|:|.||:|||||:.:|.||..:||..|::|||||||
Mouse   330 QTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQTGVESVYTTFRDREIMFHV 394

  Fly   518 STLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTPHTRYK 582
            ||.||.|:||.||||||||||||||||:|||.||||.||||||:||||:||||...|.|....||
Mouse   395 STKLPFTDGDTQQLQRKRHIGNDIVAIIFQEENTPFVPDMIASNFLHAYIVVQADNPGTETPSYK 459

  Fly   583 VSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNLC 647
            ||||||:|||.|||.||:|.||:||.||:||:||||.||||||.|::||||||.|||.:||.||.
Mouse   460 VSVTAREDVPAFGPPLPSPPVFQKGAEFREFLLTKLTNAENACCKSDKFAKLEDRTRAALLDNLH 524

  Fly   648 EELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVDTGNG- 711
            :||...|:..||..          ||..|.|:|..|.    |:::.|:|:  ||||.|::|..| 
Mouse   525 DELHTHTQVMLGMG----------PEEDKFENGGHGG----FLESFKRAI--RVRSHSMETMVGS 573

  Fly   712 ----HG---PG-----------QTDKFSVNTKLGTLNSKKETHPEMQT-----PNLNT------C 747
                ||   ||           :..|.:.:..:....:|.::...::.     |.|::      .
Mouse   574 QRKLHGGNLPGSLSGGIVHNSMEVTKTTFSPPVAAATAKNQSRSPIKRRSGLFPRLHSGSEGQGD 638

  Fly   748 SRTASKSSSKSKSSNESTSSSPDITSRQANNNNTNSIGGH-------LPQNGTGGGVVAAAVSAA 805
            |||...|:|.:..:.:...||.:|.|..::|.::..|..:       |.:||      .|.:|.:
Mouse   639 SRTRCDSASSTPKTPDGGHSSQEIKSETSSNPSSPEICPNKEKPFIKLKENG------RANISRS 697

  Fly   806 QNGVVAVATMSETSDDSSLNSVDLDPMMAHLDGGATYIDSDTGLES---MSSAEATTKACSLCLD 867
            .:   :.::.|.|:.:..        .|...|.|::...:.:..:.   ..|...::::.||   
Mouse   698 SS---STSSFSSTAGEGE--------AMEECDSGSSQPSTTSPFKQEVFAYSPSPSSESPSL--- 748

  Fly   868 GVQST--IMGSSPSNETIVKIENLRQEVTRLKCDKL 901
            |..:|  ||..||   |..|..|..:...:.:.|||
Mouse   749 GAAATPIIMSRSP---TDAKSRNSPRSNLKFRFDKL 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 8/20 (40%)
Rap_GAP 460..639 CDD:280332 125/178 (70%)
Rap1gap2XP_006533687.1 Rap_GAP 337..516 CDD:366939 125/178 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841930
Domainoid 1 1.000 262 1.000 Domainoid score I1932
eggNOG 1 0.900 - - E1_KOG3686
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 461 1.000 Inparanoid score I1551
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D163377at33208
OrthoFinder 1 1.000 - - FOG0002359
OrthoInspector 1 1.000 - - otm42989
orthoMCL 1 0.900 - - OOG6_105084
Panther 1 1.100 - - O PTHR15711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 1 1.000 - - X1790
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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