DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RapGAP1 and rsh

DIOPT Version :10

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_061500025.1 Gene:rsh / 3290563 VectorBaseID:AGAMI1_011524 Length:1556 Species:Anopheles gambiae


Alignment Length:1074 Identity:276/1074 - (25%)
Similarity:419/1074 - (39%) Gaps:288/1074 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SSAASSPK-PLHRMIKYWRNSS--GKIPGLRKSESFAEYRRHSSNSATISGGSGGRSSTSSARQL 87
            ||||..|: |........|::|  .:.|...:|.:....||.|:....:......|.||:.    
Mosquito   429 SSAARQPRSPDSSSCCSSRDASPCARPPPPTESTARPSIRRQSTTEEILIARGFRRQSTTE---- 489

  Fly    88 QYQRLEMESCENIDMLTEPLRRQHAFMANTQKQQPAGGGSGSGSVTHSPERLRGAT-TATQDLFE 151
                 ||..|.|       .|||.:...:|.:.:        |....|.:.:.|.. |.|.:...
Mosquito   490 -----EMIRCRN-------FRRQSSQSDDTSRYR--------GRRDSSAQIIDGTIGTMTVETTS 534

  Fly   152 LLERVQCSRLDDQRCVLPAYFSQNHHRGSNASEERVPQP----HSPHDSHAHPHNGGLQHSG-SR 211
            .|.|:                    |..|..|.|..|.|    :..|:.....::.||..:| ::
Mosquito   535 KLRRL--------------------HGSSQQSHESEPSPLYENNHYHEECLRCNSCGLNLTGPNQ 579

  Fly   212 ATLRHSMN------HSSSSTVSGSACSS-----TPASPQLSGVVSASGCQLLSNGHHYQSQSSVS 265
            ...|...|      |.:.  |:...||.     ....||      :.||.:...          .
Mosquito   580 KRARRFKNQILCDLHFAD--VALMECSDFMQQLRSFKPQ------SLGCAVARR----------K 626

  Fly   266 SNSSIVSAIP---ASQRLLEEALAKPAPYPMILLPLHGGYWM----------------DGTEHEC 311
            |:::::..:|   .|....|:       ||..|:|. .|||:                |.:|.|.
Mosquito   627 SSTTLIFPLPPQACSDEFCED-------YPHNLIPT-PGYWIECSRQKIAFPNQHTIWDDSESEH 683

  Fly   312 GYDARGNPLLPQ--------------------------------TTWMAK--FE-TDDTAKCYRR 341
            ...|||..:.||                                ..|..:  || |....:.|.:
Mosquito   684 EEAARGITVEPQLERNCSDLYEDDEDSDNVPSSQRFRRKKTAIEEQWEQQQGFELTSVEQETYEK 748

  Fly   342 FYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCLL-PQPSPAKM 405
            ::...||.|....||.|||::||||.|.:..::..|||:|..:.|:|.|:|.||:. .:.:..::
Mosquito   749 YFYGTEHWNYFTNDEDLGPVILSIKQETINGRDQFRILVRAISYTVHGLIPASCVFADRYNREEV 813

  Fly   406 AHTLNENITVEHFMPIL----CPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTEEELFGNQQTS 466
            ..:|.:.:.:.   |.|    .|...:.:...|:..:.|..|.||:|.:.||.|||::..|.:.|
Mosquito   814 VRSLGKEVNLN---PPLTLGQLPDTPEELLKLDQVFIKSELKVGVIYVKEGQYTEEQILDNNENS 875

  Fly   467 PAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHVSTLLPHTEGDPQQL 531
            |.|:|||.:||.::||:....|:||||..:..||..:||..::..||||||||.||:.:.|||:|
Mosquito   876 PLFEEFLQLLGDKVRLRGFDKYKGGLDTVHDLTGLYSVYTNWRSIEIMFHVSTQLPYEKHDPQKL 940

  Fly   532 QRKRHIGNDIVAIVFQET-NTPFSPDMIASHFLHAFIVVQ-PIEPNTPHTRYKVSVTARDDVPFF 594
            |||||||||||.:||.|. ||.|||..|.|||||.||:|: ........|||:|||..||:|..:
Mosquito   941 QRKRHIGNDIVCVVFLEADNTAFSPACIKSHFLHTFILVRVSARIKRKPTRYEVSVVTRDEVGAY 1005

  Fly   595 GPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNLCEELREKTRD--- 656
            .|.|...:||.||..|:|::|||::|.|.|.|.|.|||::::|||:.:|:::...|......   
Mosquito  1006 KPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDIVANLANHAETGQI 1070

  Fly   657 --------------FLGTD---LSQTSAG--------SPTPETP--------------------- 675
                          .:.||   ||.|.:|        ...|.:|                     
Mosquito  1071 PKPYRRGSWRPIDILMHTDSHILSHTDSGFLIRNCTRHMRPSSPLLDSVRDQFEDYDQLAKDFTR 1135

  Fly   676 ---KAESGSGGNA--------------GSRFIDTVKKALIMRVRSQSVDTGNGHGPGQTDKFSVN 723
               .:|.....||              .:|||..   ..|:.|||:..         |...:.:.
Mosquito  1136 VFLNSEPSCLQNAQLFDVVFLVGQSKQRARFIGV---RAILGVRSRVF---------QEMLYGIQ 1188

  Fly   724 TKLGTLNSKKETHPEMQTPNLNTCSRTA----SKSSSKSKSSNESTSSSPDITSRQANNNNTNSI 784
            |..|:          .|.|.....:|.|    |..:.:.||||  ....|||.|.:         
Mosquito  1189 TGFGS----------PQVPVAELLARPAPTLLSPQNQRPKSSN--FLQVPDIESPR--------- 1232

  Fly   785 GGHLPQNGTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLDPMMAHLDGGATYIDSDTGL 849
                |::.....:|..|.|.. ..:.|....|.....:.||:.|.....:..|..    |.| |.
Mosquito  1233 ----PKSVPSSPMVKRAFSRL-GTITAGWGRSIRKQHTQLNAEDKKKWASSQDCS----DKD-GK 1287

  Fly   850 ESMSSAEA-----TTKACSLCLDGVQSTIMGSSPSNETIVKIENLRQEVTRLKCDKLDLLRQNVT 909
            |:.|.::|     .....|:|.|..:......:.:..||::.:   .:..|:..|.|......:|
Mosquito  1288 ETSSKSKANAGQLAVPRLSVCADAQKVDRAKLAQTEFTIIEFD---PDTFRVLLDYLHTGSCPLT 1349

  Fly   910 CQRDIKRLRERELSLQGDLSAAGREILRLRDLLK 943
            |           .|:.|.:.||  |...|.:||:
Mosquito  1350 C-----------TSIPGLICAA--EHYDLPELLQ 1370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:460481 2/20 (10%)
Rap_GAP 460..639 CDD:460463 91/180 (51%)
rshXP_061500025.1 None

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