DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and Sipa1l2

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_001074806.1 Gene:Sipa1l2 / 244668 MGIID:2676970 Length:1722 Species:Mus musculus


Alignment Length:752 Identity:222/752 - (29%)
Similarity:313/752 - (41%) Gaps:175/752 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HPIIVGS-SEISLA--------------PSSAASSPKPLHRMIKYWRNSSGKIPGLRKSESFAEY 61
            |||...| |:|:::              |::.|:    |||  :|...||....||.....||..
Mouse   155 HPIRQRSNSDITISDIDTEDVLDQHAVNPNTGAA----LHR--EYGSTSSIDRQGLSGENVFAML 213

  Fly    62 R--RHSSNSATISGGSG--------GRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMAN 116
            |  |..|....::|..|        ...|.|.....|..|.|......:|.:...|      :..
Mouse   214 RGYRIESYDPKVTGSFGFPDFFPCDTAISPSLHAAAQISRGEFVRISGLDYMDGGL------LMG 272

  Fly   117 TQKQQPAGGGSGSGSVTHSPERLRGATTATQDLFELLERVQCSRLDD-------QRC-----VLP 169
            ..:.:|......|.||..|..|...|..:..:.|:....::..|||.       |||     |..
Mouse   273 RDRDKPFKRRLKSESVETSLFRKLRAVKSEHETFKFTSDLEEGRLDRGIRPWSCQRCFAHYDVQS 337

  Fly   170 AYFSQNHHRGSNAS-------------EERVPQPHSPHDSHAHPHNGGLQHS-GSRATLRHSMNH 220
            ..|:.|....:.||             ..:.|.|..|        .||.:.. ||:..| :|..:
Mouse   338 ILFNINEAMATRASVGKRKNITTGASAASQTPVPVGP--------AGGCESPLGSKEDL-NSKEN 393

  Fly   221 SSSSTVSGSACSSTPASPQLSGVVSASGCQLL----SNGHHYQSQSSVSSNSSIVS-AIPASQRL 280
            ..:....|.:.....:.|.........|.:.:    :|...:.|..|.|..||:.| ...|...:
Mouse   394 PDADEGDGKSNDLVLSCPYFRNETGGEGDRRIALSRANSASFSSGESCSFESSLSSHCTNAGVSV 458

  Fly   281 LEEALAKPAPYPMILLPLH--------------GGYWMDGTEHECGYDARGNPLLPQTTWMAKFE 331
            ||        .|....|:|              |.|:                            
Mouse   459 LE--------VPRESQPIHREKVKRYIIEHVDLGAYY---------------------------- 487

  Fly   332 TDDTAKCYRRFYAAREHSNLIGLDEQLGPILLSIKTENV-------ANQEHMRILMR------LR 383
                   ||:|:..:||.|..|:||.|||:.:||:.|.|       .:|.:.|:..|      ||
Mouse   488 -------YRKFFYGKEHQNYFGIDENLGPVAVSIRREKVEDPREKEGSQFNYRVAFRTSELTTLR 545

  Fly   384 TGTMHELLPVSCLLPQPSPAK--MAHTLNENITVEHFMP---ILC-------PKASQLISVYDEH 436
            ...:.:.:        ||.|:  .|..|.....:|:.:|   |.|       ||..:.:...||.
Mouse   546 GAILEDAV--------PSTARHGTARGLPLKEVLEYVIPELSIQCLRQAANSPKVPEQLLKLDEQ 602

  Fly   437 VLVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGD 501
            .|....|.|:||.|.||:||||::.|:...|||:||||:||||:|||....||..||.:...||.
Mouse   603 GLSFQHKIGILYCRAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTDSTGT 667

  Fly   502 TAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNT-PFSPDMIASHFLHA 565
            .::|..:|:.|:|||||||||:...:.|||.||||||||||.|||||... ||:|..|.|||.|.
Mouse   668 HSLYTTYKDFELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPKNIRSHFQHV 732

  Fly   566 FIVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEK 630
            |::|:...|.|.:..|.|.|:...|||.|||.:|....|.|...|::|:|.|:||||||.:|:||
Mouse   733 FVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLAKVINAENAAHKSEK 797

  Fly   631 FAKLEQRTRTSLLQNLCEELREKTRDFLGTDLSQTSA 667
            |..:..|||...|::|.|       :|:.|....|||
Mouse   798 FRAMATRTRQEYLKDLAE-------NFVTTATVDTSA 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 7/32 (22%)
Rap_GAP 460..639 CDD:280332 90/179 (50%)
Sipa1l2NP_001074806.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..72
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..405 10/51 (20%)
Rap_GAP 626..806 CDD:366939 90/179 (50%)
PDZ_signaling 951..1021 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1068..1246
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1331..1360
SPAR_C 1423..1666 CDD:371778
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841935
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3686
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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