DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and F53A10.2

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_001022190.1 Gene:F53A10.2 / 173502 WormBaseID:WBGene00018734 Length:811 Species:Caenorhabditis elegans


Alignment Length:916 Identity:326/916 - (35%)
Similarity:470/916 - (51%) Gaps:192/916 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 RHSSNSATI--SGGSGGRSSTSSARQLQYQRLEMESCENIDMLTEPLRRQHAFMANTQKQQPAGG 125
            ||:::...:  :|.:...|||:|         |.:.|.:...|..  ||......|.:.:.....
 Worm    32 RHATSQYNLRSTGSTSSDSSTAS---------ENDKCSDFSSLKS--RRASCIELNKEDEFKVMA 85

  Fly   126 GS----GSGSVTH--SPERLRGATTATQDLFELLERVQCSRLDDQRCVLPAYFSQNHH------- 177
            ..    ...::.|  |.:.:|..||:|:.|..:::                  |...|       
 Worm    86 ADKLLMAMENMKHATSSQAIRWRTTSTESLPGIIK------------------SNRRHSKGPLEL 132

  Fly   178 -RGSNASEERVPQPHSPHDSHAHPHNGGLQHSGSRATLRHSMNHSSSSTVSGSACSSTPASPQLS 241
             :|..|.:..|.:|       |...|.|:.   ...||       .|||||....|....:|   
 Worm   133 IQGLMAKKAAVGRP-------AKFKNLGVV---GPPTL-------ISSTVSLHEISGFTHNP--- 177

  Fly   242 GVVSASGCQLLSNGHHYQSQSSVSSNSSIVSAIPASQRLLEEALAKPAPYPMILLPLHGGYWMDG 306
                       ::||..:.....::.|::.:.:  ::.::.|.|.|..|||.|:|| ..|:||||
 Worm   178 -----------TSGHQNEQTHQKTNGSAVHNQL--TRNIMNEVLTKVGPYPQIVLP-SNGFWMDG 228

  Fly   307 TEHECGYDARGNPLLPQTTWMAKFETDDTAKCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVA 371
            ...:...|.:.|.:...:....|.|||:|:.||||.:..|||.:....|..:||::||::||.::
 Worm   229 VNQQHHMDDQVNNMNVNSCARFKLETDETSHCYRRHFFGREHHDFFANDPIVGPLVLSVRTEVIS 293

  Fly   372 NQEHMRILMRLRTGTMHELLPVSCLLPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEH 436
            :.:|.||::|.|.||:||::..:.|..:||.::||..|.|.||.|.|.|:..|..|:||..||||
 Worm   294 SCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLCEEITTEQFSPVAFPGGSELIVQYDEH 358

  Fly   437 VLVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGD 501
            ||.:.:||||:||:.||||||:||||...||||||||.::|..::|...:.||||||..:..||.
 Worm   359 VLTNTYKFGVIYQKGGQTTEEQLFGNPHGSPAFDEFLSMIGDSVQLNGFQKYRGGLDTAHNQTGH 423

  Fly   502 TAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAF 566
            .:|:..||.|||||||||:||:|.||.||||||||||||||||:|||.||||:||||||:||||:
 Worm   424 QSVFSEFKNREIMFHVSTMLPYTIGDAQQLQRKRHIGNDIVAIIFQEANTPFAPDMIASNFLHAY 488

  Fly   567 IVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKF 631
            :|||||:..|...||:|||.|||||||||||||.|::|::||:|:.|:||||||||||.||:.||
 Worm   489 VVVQPIDALTDRVRYRVSVAARDDVPFFGPTLPTPSIFKRGQDFRNFLLTKLINAENAAYKSSKF 553

  Fly   632 AKLEQRTRTSLLQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDTVKKA 696
            |||.:|||:|||..|...|||:...:....|..||:|.   |:....|.|..:.|...:.:||||
 Worm   554 AKLAERTRSSLLDGLHATLRERAEFYATPLLESTSSGG---ESAATTSSSSNSYGGGILSSVKKA 615

  Fly   697 LIMRVRSQSVDTGNGHGPGQTDKFSVNTKLGTLNSKKETHPEMQTPNLNTCSRTASKSSSKSKSS 761
            .|.|.||.                          |::.:|...:...:|..|| ..||.|.:.||
 Worm   616 FIGRSRSV--------------------------SQEASHVPHRAATINVTSR-PKKSISSTSSS 653

  Fly   762 NESTSSSP--------------DITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAAQNGVVAV 812
            ..:.:.||              :|:|:::.:|.                                
 Worm   654 TSARTHSPIRDEEVVKPYRKEWEISSQESPDNE-------------------------------- 686

  Fly   813 ATMSETSDDSSLNSVDLDPMMAHLDGGATYIDSDTGLESMSSAEAT--TKA--CSLCLDGVQSTI 873
                                  |        |||||:|||||.|.:  |:|  |:.|:|...   
 Worm   687 ----------------------H--------DSDTGMESMSSTEMSGQTRASSCTFCVDDFH--- 718

  Fly   874 MGSSPSNETIVKIENLRQEVTRLKCDKLDLLRQNVTCQRDIKRLRERELSLQGDLSAAGREILRL 938
            :.::..:....::|.|..:||||:.:|.|||||||:|:.|||:|::|:..|..:|..|..||.||
 Worm   719 VAANHQSSDAKRLETLCVDVTRLQNEKHDLLRQNVSCKTDIKKLKDRQSVLSEELERANDEISRL 783

  Fly   939 RDLLKE 944
            |.:||:
 Worm   784 RRMLKK 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 1/20 (5%)
Rap_GAP 460..639 CDD:280332 119/178 (67%)
F53A10.2NP_001022190.1 Rap_GAP 382..561 CDD:366939 119/178 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166845
Domainoid 1 1.000 259 1.000 Domainoid score I1075
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 488 1.000 Inparanoid score I783
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28778
OrthoDB 1 1.010 - - D163377at33208
OrthoFinder 1 1.000 - - FOG0002359
OrthoInspector 1 1.000 - - oto19717
orthoMCL 1 0.900 - - OOG6_105084
Panther 1 1.100 - - LDO PTHR15711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 1 1.000 - - X1790
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.940

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