DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and Rap1gap

DIOPT Version :9

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_006538538.1 Gene:Rap1gap / 110351 MGIID:109338 Length:755 Species:Mus musculus


Alignment Length:760 Identity:282/760 - (37%)
Similarity:386/760 - (50%) Gaps:196/760 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 DLFELLERVQCSRLDDQRCVLPAYFSQNHHRGSNASEERVPQPHSPHDSHAHPHNGGLQHSGSRA 212
            ||||::|::|.||:|:|||..|...        ...|:.:|.| |.|                  
Mouse    61 DLFEMIEKMQGSRMDEQRCSFPPPL--------KTEEDYIPYP-SVH------------------ 98

  Fly   213 TLRHSMNHSSSSTVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSVSSNSSIVSAIPAS 277
                                                                             
Mouse    99 ----------------------------------------------------------------- 98

  Fly   278 QRLLEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQTTWMAKFETDDTAKCYRRF 342
                 |.|.:..|:|:||||..||||::||.||........||...|| ..|.|.:.||:.||:.
Mouse    99 -----EVLGREGPFPLILLPQFGGYWIEGTNHEISSLPETEPLQSPTT-KVKLECNPTARIYRKH 157

  Fly   343 YAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCLLPQPSPAKMAH 407
            :..:||.|...||..||.::.|:|.:.:.:|||:|:|:|.:..|.|:::|:|||...|:..:||.
Mouse   158 FLGKEHFNYYSLDTALGHLVFSLKYDVIGDQEHLRLLLRTKCRTHHDVIPISCLTEFPNVVQMAK 222

  Fly   408 TLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDEF 472
            .:.|::.|:.|.|:|.||||:||..:||||:.::|||||:||:.|||:|||||...:.||||.||
Mouse   223 LVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEF 287

  Fly   473 LDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKRHI 537
            |:.|||:::|:|.||:|||||:.:|.||..:||..|:.:||||||||.||:||||.|||||||||
Mouse   288 LEFLGQKVKLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHI 352

  Fly   538 GNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNPA 602
            ||||||:|||:.||||.||||||:||||::|||..........||||||||||||||||.||:||
Mouse   353 GNDIVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPA 417

  Fly   603 VFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNLCEEL----------------- 650
            |||||.||:||:||||||||.||||||||||||:|||.:||:.|.|||                 
Mouse   418 VFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDDDKM 482

  Fly   651 -------------------REKTRDFLG------TDLSQTSAGSPTPETPKAESGSG------GN 684
                               |.::.|.:|      ..:|.:.:||.||..|.....:|      |.
Mouse   483 ENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFTPNNPDLAKAAGISLLIPGK 547

  Fly   685 AGSRF--------IDTVKKALIMRVRSQSVDTGNGHGPGQTDKFSVNTKLGTLNSKKETHPEMQ- 740
            :.|||        |..|:::||:..:|.:.......|..::....:. .:..:..|:|:.|..| 
Mouse   548 SASRFGRRGSALGIGAVEESLIVPGKSPTRKKSGPFGSRRSSAIGIE-NIQEVQEKRESPPAGQK 611

  Fly   741 TPNLNTCSRTASKSSSKSKSSNESTSSSPDITSRQANNNNTNSIGGHLPQNGTGGGVVAAAVSAA 805
            ||:       :...|.:.||.|.||.|||::.:.:      |.:                 .|||
Mouse   612 TPD-------SGHVSQEPKSENSSTQSSPEMPTTK------NRV-----------------ESAA 646

  Fly   806 QNGVVAVATMSETSDDSSLNSVDLDPMMAHLDGGATYID-SDTGL 849
            |...|.......:|..||..||     :...:|    :| .||||
Mouse   647 QRTEVLQGFSRSSSSASSFTSV-----VEETEG----VDGDDTGL 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:280368 12/19 (63%)
Rap_GAP 460..639 CDD:280332 125/178 (70%)
Rap1gapXP_006538538.1 GoLoco 61..81 CDD:366965 12/19 (63%)
Rap_GAP 275..454 CDD:366939 125/178 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841936
Domainoid 1 1.000 262 1.000 Domainoid score I1932
eggNOG 1 0.900 - - E1_KOG3686
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 461 1.000 Inparanoid score I1551
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D163377at33208
OrthoFinder 1 1.000 - - FOG0002359
OrthoInspector 1 1.000 - - otm42989
orthoMCL 1 0.900 - - OOG6_105084
Panther 1 1.100 - - LDO PTHR15711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1559
SonicParanoid 1 1.000 - - X1790
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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