DRSC/TRiP Functional Genomics Resources

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Protein Alignment RapGAP1 and rap1gap2b

DIOPT Version :10

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:XP_068071862.2 Gene:rap1gap2b / 100170821 ZFINID:ZDB-GENE-080722-11 Length:739 Species:Danio rerio


Alignment Length:824 Identity:281/824 - (34%)
Similarity:402/824 - (48%) Gaps:172/824 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 ELLERVQCSRLDDQRCVLPAYFSQNHHRGSNASEERVPQPHSPHDSHAHPHNGGLQHSGSRATLR 215
            ||..||:|.|                 .|..|:...:                ||.|...:...|
Zfish     3 ELRSRVRCRR-----------------AGVRAAAALI----------------GLLHRSRKRCER 34

  Fly   216 HSMNHSSSS------TVSGSACSSTPASPQLSGVVSASGCQLLSNGHHYQSQSSVSSNSSIVSAI 274
            ..:....|.      |:|....|..|.||..:...:....|.      :.....:...|.:....
Zfish    35 RRLTEGDSQWKQELLTISNVPLSDCPHSPPRTAPPAVKSTQF------FDMLDKMEQVSEVEEMR 93

  Fly   275 PASQRL---------LEEALAKPAPYPMILLPLHGGYWMDGTE-------HECGY------DARG 317
            |  ||:         :||.|.:..|||.::||..||||::..|       .|.|:      |.|.
Zfish    94 P--QRVKDDYIPYPRIEEVLQRGEPYPQVILPQFGGYWIEDPEAPAAIANWENGFCDDDDEDGRN 156

  Fly   318 NPLLPQTTWMAKFETDDTAKCYRRFYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRL 382
            :     ..:..|.|::...:.||:.:..|||.|........|.::||::.|.|..||::.|::|.
Zfish   157 S-----GEYGYKLESNFAIRAYRKHFLGREHLNFYCTASNHGNLVLSLRHEEVKEQEYLHIILRA 216

  Fly   383 RTGTMHELLPVSCLLPQPSPAKMAHTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVL 447
            .:.|:::.:.::.|...||..::|..|.|:|....|.|:|.||.||||..||||.|.:.|||||:
Zfish   217 PSKTIYDRISLTGLTELPSVPQLAKLLCEDIVGLRFSPVLYPKGSQLIVNYDEHELNNTFKFGVI 281

  Fly   448 YQRYGQTTEEELFGNQQTSPAFDEFLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKERE 512
            ||::|||:|||||||.:.:|||.|||.|||..::|:|.||:|||||:.:|.||..:||.|||.:|
Zfish   282 YQKFGQTSEEELFGNSEETPAFTEFLRVLGDCVQLQDFKGFRGGLDVSHGQTGSQSVYTVFKGQE 346

  Fly   513 IMFHVSTLLPHTEGDPQQLQRKRHIGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTP 577
            :|||:||.||:.|||.|||||||||||||||.||||..|||.||||||:||||:|:||.....|.
Zfish   347 LMFHISTKLPYIEGDTQQLQRKRHIGNDIVAAVFQEEATPFVPDMIASNFLHAYILVQVENSGTD 411

  Fly   578 HTRYKVSVTARDDVPFFGPTLPNPAVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSL 642
            ...||||||||:|||.|||.||||.:|:||.||:||:||||||||.|||::.:|||||:||||.|
Zfish   412 EATYKVSVTAREDVPQFGPPLPNPPIFKKGPEFREFLLTKLINAELACYRSNRFAKLEERTRTEL 476

  Fly   643 LQNLCEELREKTRDFLGTDLSQTSAGSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVD 707
            |.||..||:::|:..||..|:        |:..:.|:|..|.    .::::|:|  |||||.|::
Zfish   477 LDNLHNELQKRTQSMLGHPLN--------PDEERMENGGHGG----ILESIKRA--MRVRSHSME 527

  Fly   708 T--------------GNG-----------HGPGQTDKFS--------------VNTKLG---TLN 730
            |              |.|           |...:..|.|              |..:.|   .|.
Zfish   528 TMVGTHKHGRCSPAAGAGVPTSLSGVSLTHSSSEAAKNSSPVTSSAKSPLKSPVKRRSGLFPRLY 592

  Fly   731 SKKETHPEMQTPNLNTCSRT--ASKSSSKSKSSNESTSSSPDITSRQANNNNTNSIGGHLPQNGT 793
            :..:..||..|.::....|:  ....|.:.||...|..|||:|.:.:..:.....:.|  |.:  
Zfish   593 TSMDEQPERHTRSVLCDQRSLDCGHLSQEVKSETSSNPSSPEILNNERPSLKLQEVSG--PPD-- 653

  Fly   794 GGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLDPMMAHLDGGATYIDSDTGLESMSSAEAT 858
                 .:..|::.:...:.|...||.::...:.|.:.|.::.:.|                    
Zfish   654 -----ISRSSSSTSSFSSAAGEPETVEEKEPSGVQISPSLSPVFG-------------------- 693

  Fly   859 TKACSLCLDGVQS---TIMGSSPS---NETIVKIENLRQEVTRL 896
                ||..||..:   .||..||:   |:|..: .||:....||
Zfish   694 ----SLTTDGQAAGAPVIMCRSPTDFRNKTSPR-SNLKFRFDRL 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:460481 6/16 (38%)
Rap_GAP 460..639 CDD:460463 118/178 (66%)
rap1gap2bXP_068071862.2 None

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