DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RapGAP1 and rap1gapa

DIOPT Version :10

Sequence 1:NP_001097114.2 Gene:RapGAP1 / 34032 FlyBaseID:FBgn0264895 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_001116525.2 Gene:rap1gapa / 100144557 ZFINID:ZDB-GENE-080402-9 Length:695 Species:Danio rerio


Alignment Length:704 Identity:279/704 - (39%)
Similarity:386/704 - (54%) Gaps:142/704 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 LEEALAKPAPYPMILLPLHGGYWMDGTEHECGYDARGNPLLPQ----TTWMAKFETDDTAKCYRR 341
            :.|.|.:.:|:|:||||..||||::||.||.   :.||.  |:    .|...|.|.:.|||.||:
Zfish    24 VHEVLGRKSPFPLILLPQFGGYWIEGTNHEL---SNGND--PEQFVSPTSRYKLECNTTAKIYRK 83

  Fly   342 FYAAREHSNLIGLDEQLGPILLSIKTENVANQEHMRILMRLRTGTMHELLPVSCLLPQPSPAKMA 406
            .:..:||.|...:|..||.::.|:|.:.:.:|||:|:::|.:..|.|:::|:|||...|:..:||
Zfish    84 HFLGKEHFNYYTVDSALGHLVFSMKYDVIGDQEHLRLMLRTKMKTHHDVIPISCLTEFPNIVQMA 148

  Fly   407 HTLNENITVEHFMPILCPKASQLISVYDEHVLVSHFKFGVLYQRYGQTTEEELFGNQQTSPAFDE 471
            ..:.|.:.|:.|.|:|.||||:||..:||||:.::|||||:||::|||:|||||||.:..|||.|
Zfish   149 KLVCEEVNVDRFFPVLYPKASRLIVTFDEHVISNNFKFGVIYQKFGQTSEEELFGNNEEGPAFVE 213

  Fly   472 FLDVLGQRIRLKDHKGYRGGLDIQNGHTGDTAVYEVFKEREIMFHVSTLLPHTEGDPQQLQRKRH 536
            ||:.|||:|.|.|.||:|||||:.:|.||..:||..|..:||||||||.||:||||.||||||||
Zfish   214 FLEFLGQKIELHDFKGFRGGLDVTHGQTGSESVYHNFHNKEIMFHVSTKLPYTEGDTQQLQRKRH 278

  Fly   537 IGNDIVAIVFQETNTPFSPDMIASHFLHAFIVVQPIEPNTPHTRYKVSVTARDDVPFFGPTLPNP 601
            ||||||||||||.||||.||||||:||||::|||.....:....||||||||||||||||.||||
Zfish   279 IGNDIVAIVFQEENTPFVPDMIASNFLHAYVVVQVENACSDDVLYKVSVTARDDVPFFGPPLPNP 343

  Fly   602 AVFRKGQEFKEFILTKLINAENACYKAEKFAKLEQRTRTSLLQNLCEELREKTRDFLGTDLSQTS 666
            |||:||.||.||:|:||||||.||||||||||||:|||::||:.|.|||...::..:|..     
Zfish   344 AVFKKGPEFHEFLLSKLINAEYACYKAEKFAKLEERTRSALLETLYEELHINSQAMMGLG----- 403

  Fly   667 AGSPTPETPKAESGSGGNAGSRFIDTVKKALIMRVRSQSVDT----------GNGHG-------- 713
                 .|..|.|:|.||..|. |.::.|:  ::|.||||:||          .|.|.        
Zfish   404 -----GEEDKLENGGGGGGGG-FFESFKR--VIRSRSQSLDTMGLNIRKYTVSNSHSGSFAHNNN 460

  Fly   714 -----------------PGQT-----------------------DKFSVNTKLGTLNSKK----- 733
                             ||::                       .|.....|.|..:|::     
Zfish   461 NLHSPETPKPPGISLLVPGKSPSKYGRRGSAIGIGTIEESLIIPGKSPTRKKSGPFSSRRSSAIG 525

  Fly   734 -ETHPEMQTPNLNTCSRTASK------SSSKSKSSNESTSSSPDITSRQANNNNTNSIGGHLPQN 791
             |...|:|..:...||.:..|      :|...||.|.|..|||::...: |::|.......:|: 
Zfish   526 IENIQEVQEKSSRECSPSTQKTPDSGHASQDPKSENSSNQSSPEVLITK-NSSNLYCRAPSIPE- 588

  Fly   792 GTGGGVVAAAVSAAQNGVVAVATMSETSDDSSLNSVDLDPMMAHLDGGATYIDSDTGLESMSSAE 856
                   |..:|.:.:...:.|::.|.::..:..                  |.|||:||:|||:
Zfish   589 -------AHDLSRSSSNASSFASVVEENETEATE------------------DYDTGMESLSSAD 628

  Fly   857 ATTKACSLC--------LDGVQSTIMGSSP---------------SNETIVKIE 887
            ...|..|..        :....:|..||||               .|.|.::|:
Zfish   629 TPHKRDSFTYSTWLEDNMSTNSTTSRGSSPGPGRNQQTDGGKNQDQNRTDIRIK 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RapGAP1NP_001097114.2 GoLoco 147..168 CDD:460481
Rap_GAP 460..639 CDD:460463 128/178 (72%)
rap1gapaNP_001116525.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.