DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp28a and Obp83cd

DIOPT Version :10

Sequence 1:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_649612.1 Gene:Obp83cd / 40746 FlyBaseID:FBgn0046878 Length:242 Species:Drosophila melanogaster


Alignment Length:142 Identity:30/142 - (21%)
Similarity:49/142 - (34%) Gaps:37/142 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSTPIILVAIVLLGAALVRAFDEKEALAKLMESAES---CMPEVGATDADLQEMVK--KQPAST 60
            ||....||:|:.|       .....|.||.|....|:   |:...|...|:..|.::  |:.:.:
  Fly     1 MQMKSGILIALCL-------CLSLNEGLALLEHEGETINRCIQNYGGLTAENAERLERFKEWSDS 58

  Fly    61 YAG-KCLRACVMKNI-------------GILDANGKLDTEAGHEKAKQYTGNDPAKLKIALEIGD 111
            |.. .|...|.:..:             ||:...|:...||..:           ||::..|.|:
  Fly    59 YEEIPCFTRCYLSEMFDFYNNLTGFNKDGIVGVFGRPVYEACRK-----------KLELPFESGE 112

  Fly   112 TCAAITVPDDHC 123
            :.........||
  Fly   113 SSCKHAYEGFHC 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp28aNP_523505.1 PBP_GOBP 24..134 CDD:460193 24/119 (20%)
Obp83cdNP_649612.1 PhBP 30..129 CDD:214783 19/106 (18%)
PhBP 149..242 CDD:214783
Blue background indicates that the domain is not in the aligned region.

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