DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp28a and Obp83a

DIOPT Version :9

Sequence 1:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_001287190.1 Gene:Obp83a / 40737 FlyBaseID:FBgn0011281 Length:174 Species:Drosophila melanogaster


Alignment Length:153 Identity:35/153 - (22%)
Similarity:61/153 - (39%) Gaps:22/153 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 STPIILVAIVLLGAALV-----RAFDEKEALAKLMESA----ESCMPEVGATDADLQEMVKKQPA 58
            |..::|:|:.||..||:     ...||......:::.|    ::|:.:.|.|:|.::|....:..
  Fly    31 SASVLLIALSLLSGALILPPAAAQRDENYPPPGILKMAKPFHDACVEKTGVTEAAIKEFSDGEIH 95

  Fly    59 STYAGKCLRACVMKNIGILDANGKLDTEAGHEKAKQYTGNDPAKLKIAL-EIGDTCAAITVP--D 120
            .....||...|....|.::|.||.:..|       :.....|..::..| |:...|..   |  |
  Fly    96 EDEKLKCYMNCFFHEIEVVDDNGDVHLE-------KLFATVPLSMRDKLMEMSKGCVH---PEGD 150

  Fly   121 DHCEAAEAYGTCFRGEAKKHGLL 143
            ..|..|..:..|::....||..|
  Fly   151 TLCHKAWWFHQCWKKADPKHYFL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp28aNP_523505.1 PhBP 35..134 CDD:214783 23/105 (22%)
Obp83aNP_001287190.1 PBP_GOBP 64..166 CDD:279703 23/111 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452919
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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