DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp28a and Obp56b

DIOPT Version :9

Sequence 1:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_611443.1 Gene:Obp56b / 37265 FlyBaseID:FBgn0046880 Length:137 Species:Drosophila melanogaster


Alignment Length:132 Identity:38/132 - (28%)
Similarity:62/132 - (46%) Gaps:15/132 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IVLLGAALVRAFDEKEA------LAKLMESAESCMPE--VGATDADLQEMVKKQPASTYAGKCLR 67
            |.||...|:.|..|..|      ||...:..::|:.|  :.|:||:|....|:....:.:.||..
  Fly     4 IYLLVVFLIFALSELVAGQSAAELAAYKQIQQACIKELNIAASDANLLTTDKEVANPSESVKCYH 68

  Fly    68 ACVMKNIGILDANGKLDTEAGHEKAK-QYTGNDPAKLKIAL-EIGDTCAAITVPDDHCEAAEAYG 130
            :||.|.:|:|..:||.:|:...:.|: :::.....|||..| ..|.|.:|.|     |:....|.
  Fly    69 SCVYKKLGLLGDDGKPNTDKIVKLAQIRFSSLPVDKLKSLLTSCGTTKSAAT-----CDFVYNYE 128

  Fly   131 TC 132
            .|
  Fly   129 KC 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp28aNP_523505.1 PhBP 35..134 CDD:214783 29/102 (28%)
Obp56bNP_611443.1 PhBP 35..135 CDD:214783 29/101 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012672
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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