DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp28a and Obp56i

DIOPT Version :9

Sequence 1:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster
Sequence 2:NP_725929.1 Gene:Obp56i / 246667 FlyBaseID:FBgn0043532 Length:140 Species:Drosophila melanogaster


Alignment Length:145 Identity:37/145 - (25%)
Similarity:55/145 - (37%) Gaps:34/145 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILVAIVLLGAALVRAFDEKEALAKLMESAESCMPEVGATDADLQEMVKKQPASTYAGKCLRACVM 71
            :|:.:|.|....|:|...|          :.||...|.|..|:....:..... ::.||...|.:
  Fly     9 LLLVVVTLPTCFVQAGPIK----------DQCMAAAGITAQDVANRHETDDPG-HSVKCFFRCFL 62

  Fly    72 KNIGILDAN----GKLDTEAGHEKAKQYTGNDPAKLKIALE-IGDTCAAI---TVPDDHCEAAEA 128
            :||||:..|    |..|...||....:           |:| :..||..|   |..|:.||.|..
  Fly    63 ENIGIIADNQIIPGAFDRVLGHIVTAE-----------AVERMEATCNMIKSETSHDESCEFAWQ 116

  Fly   129 YGTCFRG----EAKK 139
            ...|:.|    :.||
  Fly   117 ISECYEGVRLSDVKK 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp28aNP_523505.1 PhBP 35..134 CDD:214783 28/106 (26%)
Obp56iNP_725929.1 PBP_GOBP 25..121 CDD:279703 28/117 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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