DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ziz and dock4b

DIOPT Version :10

Sequence 1:NP_001260200.1 Gene:Ziz / 34030 FlyBaseID:FBgn0260486 Length:2298 Species:Drosophila melanogaster
Sequence 2:NP_001159700.1 Gene:dock4b / 654774 ZFINID:ZDB-GENE-060130-74 Length:1977 Species:Danio rerio


Alignment Length:2154 Identity:393/2154 - (18%)
Similarity:717/2154 - (33%) Gaps:708/2154 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 VVQNPK-RGRF-CFELRMTTGH------------KSFTLAAENEQDFKDWLSKISSVLAQNRAQE 399
            |::||. :|.| |..:.:...|            ...::..|.....:||.:....:..:|....
Zfish    73 VLKNPNAKGIFPCCYIHLKNAHIKNKGQFETVVPSEDSVITEMTSTLRDWGAMWKQLFVKNEGDL 137

  Fly   400 EKR-------NASLERHPSIGSNPSPQLQPPAMDPPTFGTLKGLDQSLHPQLMKYGRETDHSIAL 457
            ..|       ...|.|...:|.             .|...::.:.|.:..:| .:|.|......:
Zfish   138 FNRLWHVMNEILDLRRQVLVGH-------------LTHDRMRDVKQHITARL-DWGNEQLGLDLV 188

  Fly   458 ARREQRRRLFACYQSPVKGSGSDNVEQYR--EH----FGTRLLLTCHNLRFRLQCIPQDESSAGG 516
            .|||         .|.|........|.||  ||    ..|...::.|:|...|:.:   .||..|
Zfish   189 PRRE---------FSMVDPDDISVTELYRLMEHRHRKKETPAPVSTHHLFVHLKSL---MSSNLG 241

  Fly   517 VEQQVEPYITSLALFDAKANRKLSENFYFNVNEQWAAQLLPNTPVPSSVAGCGVPRKSAEGDERS 581
            .|.:|..:|     :|::.||.|||.|:..:|:.                  |:| |..|..||.
Zfish   242 EELEVFFFI-----YDSRENRPLSERFFVKLNKN------------------GLP-KFPEKTERQ 282

  Fly   582 TACQAPHSLFDGVSAELLRSNRQQFQQLRQCLLSVTAPHADIYLVVRIEKILQSGIAQVTEPYLK 646
              |    :||..:.:..||.                    |:|:||.|.:|.:.|          
Zfish   283 --C----TLFVDLGSSDLRK--------------------DVYIVVHIIRIGRMG---------- 311

  Fly   647 AGKDPKLGQKVYKAAKSYAQHIGHYRQPFAWAARPLFKQYSHELDVDPKREFEFSPIYRQEIPKL 711
            ||:...|...             .||:||..|...:    :..|..|.                 
Zfish   312 AGEKKNLCNV-------------QYRRPFGCAVVSI----ADLLTADS----------------- 342

  Fly   712 KDEELLKLLV-----DYRK-----PEKLSKLTIIPGS---LKMQMQFL----DQ---------TT 750
            ||:.|||:..     |:.:     .:|::....:.||   |.:.:|.|    :|         |.
Zfish   343 KDDHLLKVYACNTESDWSQIHDNIIKKVNSRYNLSGSNTGLAVALQLLHGDIEQLRREYMVLFTR 407

  Fly   751 PCGLSKSLAPLSTFSPSSKQSP---TVEVAEFQSQSERDAHPYTSFCNHLYVYPLSLQFDSQKLF 812
            ...::|.|.......|...::.   |:|..||:...:                            
Zfish   408 GVSITKKLGFSDVIMPGEMRNDLYMTLEKGEFEKGGK---------------------------- 444

  Fly   813 SRARNITVVVELRDGDGEYSKPLKCI-YGRPGQDLLVSQIACPVLHHNVTPTWYEEIKLRLPLGL 876
            |.|||:.:.:...|.||:..|....: .|.||.|    :....||:||.:|.|.|:|||.:|:.:
Zfish   445 SVARNVEITIYALDADGQILKGFVAVGSGEPGGD----EYHTFVLYHNNSPRWAEQIKLPIPVDM 505

  Fly   877 FPEHHLLFSFYHVSCNLSKKRDANAAFETPIGYAWLPLLQKNRICLEEQQLPVAATLPVG----- 936
            |...|:.|.|.|.|   :|.:.....|    |::::||:|::           ..|||.|     
Zfish   506 FRGSHVRFEFRHCS---TKDKGEKKLF----GFSFVPLMQED-----------GRTLPDGTHELI 552

  Fly   937 ---------------YLSIQPLGWGKGNCGPDIQWIDNQRNLYTVGLRLDSTVLTADQHLHNFF- 985
                           ||.   |.:.|.|...:.|.:...:....:...|.||.||.:..:.:.. 
Zfish   553 VHKCEENANLQDCSRYLK---LPFSKSNLPGNNQTVKGTKESLWITSFLCSTKLTQNGDMLDLLK 614

  Fly   986 --GHCERLLEGGKTGAVPAETETCKILKAAHAIDMKSLINYLPTVLNELFTLLVHTQSEEIGLNV 1048
              .|.||:.:.               |.....||...::.:|...|:.||.:| ...|:...|.|
Zfish   615 WRAHPERISDS---------------LSKLKEIDGSEIVKFLQDTLDTLFGIL-DESSQRYALKV 663

  Fly  1049 IRLITNIIHLISDQAKR--SDLLGAYVKYVFHAPYYSQQTAR------QRTVHGELCRHLPYLLN 1105
            ...:.:||:|:.|...:  ..::..|::..|......:...:      .|.:..:...|      
Zfish   664 FDCLVHIINLLQDSKFQHFKPVMDTYIESHFAGALSYRDLIKVLKWYVDRIIDADRQEH------ 722

  Fly  1106 PSNPDFLIVNKFMRYSSIFFDLIIKSMAQHLLATGRIRMLRNERFPKEYGDRVEQLIKALMPYIT 1170
                    :.:.::.:...|..|::|.....||||.    :||   :|:...:.:|..::..:::
Zfish   723 --------IQQVLKATEYIFKYIVQSRRLFALATGG----QNE---EEFRCCMHELFMSIRFFLS 772

  Fly  1171 TRFEDLSEETH---------------LLN----RSLAKFVRQCLSYMDRGFVFRLIRCYMGEFSP 1216
            ...:.:...||               ||.    |.:|.|||:.|..:...            ..|
Zfish   773 QENKSMRPITHTQAVFLQSFPAVYNELLKLFTVREVATFVRETLGSLPTA------------SQP 825

  Fly  1217 GNPRILHEYKFNFLQEICQHEHYVPLNLPFVLNPKNRPPEMMQHFTLSEQFCRQHFLSGLLLQEL 1281
            ..|  |...|.:.:.:....:.|.        ||.:|              |   .|..::|:.|
Zfish   826 DCP--LEAVKLHCIAKTVDSQLYT--------NPDSR--------------C---VLLPVVLRLL 863

  Fly  1282 KSSLNEVGHVRR------HALGIFKDLLAKHELDNRYQQKGQLSRIALLYVPWLGVVMDNIHRID 1340
            ::.:.|    :|      |.|.....||.|.:.|:...::     :.|:....|.|::..|..:.
Zfish   864 QAHMQE----QRDLVMCAHILTCMLSLLKKDDTDSSSSEE-----VDLIVESVLAVLLRTILEVA 919

  Fly  1341 DLSESGACTPNGHVYADSASYTKRLSCSSSYVFSKDSSTFGSLTSTPRSKNRLTMHCDQASPYRT 1405
            :..:....|....|...:..:   :||               |.:..|                 
Zfish   920 NRPQPAGPTLRPQVQDVTGEF---VSC---------------LLALLR----------------- 949

  Fly  1406 SVHMKEHNYLAAIAGQPISNGISNLSLNSNTDSGHSQDTTTIGAYTNGDTDVALRNGHNRSVSVT 1470
              |||:.:|                                                        
Zfish   950 --HMKDKHY-------------------------------------------------------- 956

  Fly  1471 HAQILSRCDKFSSVES-KDLLLGFLFIIKHLSQEQMI--GWWQNCNESETLQFLSILDLCLLQFR 1532
             .|:|.|   |:|.|. :|.||....:.:.|.:.:|.  .|             :::.|.     
Zfish   957 -QQLLQR---FTSKEDLRDFLLHIFTVFRILIRPEMFPKDW-------------TVMRLV----- 999

  Fly  1533 YVGKKSVVITTETRQGRLAKANTLPARTQPPTGLENGSQEQQPSSGTLNQTREHLLEDIDTLARN 1597
               ..:::|||                                           :|...|.|.:|
Zfish  1000 ---TNNIIITT-------------------------------------------VLYLSDALRKN 1018

  Fly  1598 QLA------LYESNLATEVGMIILDCLGLYVLQFRQLLADSLVLPKVA--RVYLRFLQLGQSERL 1654
            .|:      :::|.....|..|...||.|......:   ...:|.|..  ||.:........:.|
Zfish  1019 FLSEKFDYKVWDSYFCLSVIFINQTCLQLETFSASK---KKKILEKYGDMRVMMGCEIFSMWQNL 1080

  Fly  1655 SKHVFAALRAFINNYAVALFKGNAMLCGQMVYELLKACDSR--LVEIRHESCAVLYLLMRSNFEF 1717
            .:|....:.|.|..:              :...|:...|.|  ::.|.|:       :|......
Zfish  1081 GEHKLNFIPAMIGPF--------------LEVTLVPQPDLRNVMIPIFHD-------MMDWEQRR 1124

  Fly  1718 SGRKALTRVHLQVIISVSQMIGNVIGLNNARFQESLSIINSYANSDKAMKGTGFPMEVKDLTRRV 1782
            ||.  ..:|..::|..:..::..  |..:..::|..:.|.......:..:.:|..: :..:||.:
Zfish  1125 SGN--FKQVEAKLIDKLDSLMSE--GKGDETYRELFNSILLKKIERETWRESGISL-IATVTRLM 1184

  Fly  1783 RTVLMATAQMQAHHMDPERLLELQYSLANSY---ASTPELRHTWLVTMARNHEQNGNLSEAACCH 1844
            ..:|.....|:...:|.:: :....||.|.|   .:..|:...::..:...|.:..|.:||:   
Zfish  1185 ERLLDYRDCMKLGEVDGKK-IGCTVSLLNFYKTELNKEEMYIRYIHKLYDLHLKAQNYTEAS--- 1245

  Fly  1845 LHIAALMCEYLRLKGGCTLSWSSTAFGKISTNIPLDE-QGLKLDAGAQDSQYTEQMLLEQLKLCA 1908
                     |..|.....|.||..         ||.| ....:.:..|..:|....:::.     
Zfish  1246 ---------YTLLLYDELLEWSER---------PLREFLSYPMQSEWQRKEYLHLTIIQN----- 1287

  Fly  1909 DFLDRAERFECLGELYKLILPMYERDRSYQDLAHCYEHLTQAYNKIVEVNRSGKRMLGRFYRVVF 1973
              .||.:.:|....|.:.:...||....|::|:.........|:||::    .:|:...|:||.|
Zfish  1288 --FDRGKCWENGILLCRELADQYESYYDYRNLSKMRMMEASFYDKIMD----QQRLEPEFFRVGF 1346

  Fly  1974 YG--LMYFEEDHAIEFVYKEPKLTSLSEISERLAKQYKEKFGADVVKMIMDSSPVKVDE--LDAK 2034
            ||  ..:|..:.  |||.:......|....:|:..::..     .:.|...:.|   |:  ..|:
Zfish  1347 YGKKFPFFLRNK--EFVCRGHDYERLEAFQQRMLNEFPH-----AIAMQHANQP---DQTIYQAE 1401

  Fly  2035 LAYIQVTHVIPF------FSKDELDQRLNEFEQNHDVDTFMYETPFTKSGAARGSVEEQ------ 2087
            ..|:|:..|.|.      ..:|.:...:..|.:.:.:..|.|:.||.|     |:.:::      
Zfish  1402 AQYLQIYAVTPIPDSQDVLQRDGVPDNIKSFYKVNHIWRFRYDRPFHK-----GTKDKENEFKSL 1461

  Fly  2088 WKRKTVIKTQYSFPYVLKRIPVKSREIIELSPIEVAIDEMQSKVSELEEIIL-----PPADVKKL 2147
            |..:|.:....|.|.:.:...|:.||::|:||:|.||:.:::|..:|..:|.     ...::..|
Zfish  1462 WVERTTLTLVQSLPGISRWFEVERRELVEVSPLENAIEVIENKNLQLRTLITQCQTRQMQNINPL 1526

  Fly  2148 QLRLQGSVAVTVNAGPLAYAHAFLDAKVVNNFSM------DRVGDLKDVFRDFIVVCQKALFLNE 2206
            .:.|.|.:...||.|...|..||.    |.::.|      |::|.|:::..:...:.:..|.::|
Zfish  1527 TMCLNGVIDAAVNGGLARYQEAFF----VKDYIMNHPEDGDKIGRLRELMFEQAHILEFGLTVHE 1587

  Fly  2207 RIISADQKEYHHVLKENYEKLCQAL-------------------------------------SEL 2234
            :.:..|.:..|..|.:.:..:..:|                                     :.:
Zfish  1588 KFVPQDMRPLHKKLVDQFHLMKSSLGIQEFPAYVRASPIHFTNGSPRVGRNSAPNIMSPDGGARV 1652

  Fly  2235 LDDESFQPLGDDADSINQRNSMAL-------FNAISGASHNSRPYFVDQ---NTSNSTHHHSSHI 2289
            :...|  ||...|  :|:.:|.:|       .:.|:|.|.:|...|..|   :||:.:.:||:..
Zfish  1653 VSRRS--PLSYPA--VNRYSSSSLSSQASNEVSNITGHSESSDEVFNMQPSPSTSSLSSNHSASP 1713

  Fly  2290 NTQNSTHHS 2298
            |..:|...|
Zfish  1714 NVSSSAPSS 1722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZizNP_001260200.1 DOCK_C-D_N 37..>81 CDD:463380
PH_DOCK-D 278..405 CDD:270087 12/76 (16%)
C2_Dock-D 793..981 CDD:176079 50/208 (24%)
DHR2_DOCK_D 1818..2231 CDD:212567 90/440 (20%)
dock4bNP_001159700.1 SH3_DOCK4_B 38..91 CDD:212982 6/17 (35%)
DOCK_N 99..418 CDD:465040 85/438 (19%)
C2_Dock-B 426..609 CDD:176077 54/235 (23%)
DHR2_DOCK4 1222..1612 CDD:212578 90/440 (20%)
PHA03247 <1713..1977 CDD:223021 3/10 (30%)
Blue background indicates that the domain is not in the aligned region.

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