DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6055 and slf

DIOPT Version :10

Sequence 1:NP_609122.1 Gene:CG6055 / 34027 FlyBaseID:FBgn0031918 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_608858.3 Gene:slf / 33678 FlyBaseID:FBgn0287234 Length:231 Species:Drosophila melanogaster


Alignment Length:206 Identity:100/206 - (48%)
Similarity:132/206 - (64%) Gaps:13/206 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RRLALPDPRSCANRVRHASYRDARGVSHSYFFSWEHAPT-RSLEVDWLDARNICRRHCMDAVSLE 84
            |.|:||.|..||:|.:..|||...      .|...|.|. .:.:|||||.||:||.:|||.|:||
  Fly    32 RFLSLPVPAKCASRPKEFSYRGKN------MFLTTHVPALANKKVDWLDGRNLCREYCMDLVALE 90

  Fly    85 TPQENDFVKQRIARGNVRYIWTSGRKCNFAGCD-RPDLQPPNENGWFWSGSGAKIGPTSQRNTG- 147
            |.::|:.:.:.|.:.:|.||||:||.|:||||: ||||:|....|||||.:..||..|::...| 
  Fly    91 TQEKNNLIFRVIQQNDVPYIWTAGRICDFAGCENRPDLEPKTVYGWFWSATREKIQATNRIPQGW 155

  Fly   148 ---DWSSTGGYQQPQPDNRE-AAQGNDESCLSILNNFYNDGIKWHDVACHHIKPFVCEDSDELLN 208
               .||.||..::|||||.| ......|.|||:|||.|||||.||||||:|.||.:|||::|||.
  Fly   156 GYNPWSQTGHKKRPQPDNAEYDINQTKEQCLSVLNNVYNDGIAWHDVACYHEKPVICEDNEELLR 220

  Fly   209 FVRSRNPNVRL 219
            :|.:.||.:||
  Fly   221 YVAATNPGIRL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6055NP_609122.1 CLECT 50..201 CDD:153057 78/157 (50%)
slfNP_608858.3 CLECT 67..213 CDD:153057 75/145 (52%)

Return to query results.
Submit another query.