DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6055 and si:ch211-225k7.4

DIOPT Version :9

Sequence 1:NP_001260199.1 Gene:CG6055 / 34027 FlyBaseID:FBgn0031918 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001116876.1 Gene:si:ch211-225k7.4 / 100002702 ZFINID:ZDB-GENE-060503-28 Length:367 Species:Danio rerio


Alignment Length:166 Identity:42/166 - (25%)
Similarity:64/166 - (38%) Gaps:53/166 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VDWLDARNICRRHCMDAVSLETPQEND----FVKQRIARGNVRYIWTSGRKCNFAGCDRPDLQPP 124
            ::|.||::.||::.:|.||:....||.    |:..|.:.|:.  :|        .|..|      
Zfish   143 MNWRDAQSYCRQNHIDLVSVRNQNENQQLEKFINDRKSSGST--VW--------IGLFR------ 191

  Fly   125 NENGWFWSGSGAKIGPTSQRNTGDWSSTGGYQQPQPDNREAAQGNDESCLSILNNFYNDGIKWHD 189
              :.|.||...:             ||...:...|||||    |..|:|..|..|...   :|||
Zfish   192 --DSWQWSDQSS-------------SSFRYWDNNQPDNR----GGIENCTVITQNVQR---QWHD 234

  Fly   190 VAC-HHIKPFVCEDS----------DELLNFVRSRN 214
            ::| ||....:|.|.          .|.|.:.|..:
Zfish   235 ISCEHHFCFVLCPDKLLVVQQNLLWSEALRYCRQHH 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6055NP_001260199.1 CLECT 50..201 CDD:153057 37/141 (26%)
si:ch211-225k7.4NP_001116876.1 CLECT 23..131 CDD:295302
CLECT 134..244 CDD:295302 37/138 (27%)
CLECT 251..364 CDD:153057 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.