DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6055 and si:dkey-28d5.3

DIOPT Version :9

Sequence 1:NP_001260199.1 Gene:CG6055 / 34027 FlyBaseID:FBgn0031918 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_009301145.1 Gene:si:dkey-28d5.3 / 100000327 ZFINID:ZDB-GENE-060503-919 Length:361 Species:Danio rerio


Alignment Length:190 Identity:47/190 - (24%)
Similarity:66/190 - (34%) Gaps:55/190 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VSHSYFFSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENDFVK--QRIARGNVRYIWTSG 108
            |...|.|..|       :.:|.||:..||.:.  .|.......||.::  :.:..|.|..||.. 
Zfish    21 VQRQYHFINE-------KKEWADAQRYCRENY--TVLATVDNRNDMIQLNKSVNYGFVENIWIG- 75

  Fly   109 RKCNFAGCDRPDLQPPNENGWFWSGSGAKIGPTSQRNTGDWSSTGGYQQPQPDNREAAQGN---- 169
                        |...:...|.|| ||   .|.|..|   |:|    :||...|..|...|    
Zfish    76 ------------LHKTSVYKWHWS-SG---DPVSFLN---WAS----EQPNSSNECAVMNNGQWI 117

  Fly   170 DESC----LSILNN------FYNDGIKWHDVACHHIKPFVCEDSDELLNFVRSRNPNVRL 219
            :|.|    :.|..|      |.|..:.|.|...:      |..:...|..||::|.|.:|
Zfish   118 NEKCSNTRVFICYNMSRGLVFVNQEMNWRDAQSY------CRQNHIDLVSVRNQNENQQL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6055NP_001260199.1 CLECT 50..201 CDD:153057 39/166 (23%)
si:dkey-28d5.3XP_009301145.1 CLECT 23..131 CDD:295302 34/140 (24%)
CLECT_1 134..240 CDD:153072 11/44 (25%)
CLECT 246..358 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1038166at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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