DRSC/TRiP Functional Genomics Resources

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Protein Alignment santa-maria and Cd36l1

DIOPT Version :10

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001102688.2 Gene:Cd36l1 / 499985 RGDID:1565355 Length:472 Species:Rattus norvegicus


Alignment Length:497 Identity:135/497 - (27%)
Similarity:248/497 - (49%) Gaps:51/497 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GQKSNRKLIIG-IFGFCLGLFGILCGMFWVDLFDWIMHKEMALAPDTRVYENWKSPPIDLSLDIY 73
            |...|..||.| :.|..|.:||.:.......|.:..:.:|:.|...|..::||......:....:
  Rat     2 GCDRNCGLITGAVIGAVLAVFGGILMPVGDLLIEKTIKREVVLEEGTIAFKNWVKTGTTVYRQFW 66

  Fly    74 LYNWTNPEDFGNLSTKPILEQVGPYRF-IERPDKVDIHWHPENASVTYRRRSLFYFDAAGSNGSL 137
            :::..|||:....|:|..::|.|||.: :....|.:|...|::::|::.:.:...|:.:.|.|:.
  Rat    67 IFDVQNPEEVAKNSSKIKVKQRGPYTYRVRYLAKENITQDPKDSTVSFVQPNGAIFEPSLSVGTE 131

  Fly   138 DDEITTLNAVALSAAA---TAKYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDAMIDVA 199
            :|..|.|| :|::||.   |..:...|..||:    |...:.|...:|:.|||: ||.|..:.: 
  Rat   132 NDNFTVLN-LAVAAAPHIYTNSFVQGVLNSLI----KKSKSSMFQTRSLKELLW-GYKDPFLSL- 189

  Fly   200 MAMPIFGDEVKVPF---DKFGWFYTRNGSADLTGVFNVFTGADQLAKLGQMHSWNYQENTGFFDS 261
                       ||:   ...|.||..|.:.|  ||:.||.|.|.::|:..:.::..:.|..:::|
  Rat   190 -----------VPYPISTTVGVFYPYNNTVD--GVYKVFNGKDNISKVAIIDTYKGKRNLSYWES 241

  Fly   262 YCGMTNGSAGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDIEGLEGYKFSGGPRSVDNGTQY 326
            ||.|.||:.....|..::...::..|:.|:||:|...:...|:::|:..|:|.....:..:..|.
  Rat   242 YCDMINGTDAASFPPFVEKSRTLRFFSSDICRSIYAVFESEVNLKGIPVYRFVLPANAFASPLQN 306

  Fly   327 PENLCFC-----GGQCVPSGVMNISSCRFGSPVFMSYPHFFNADPYYPDQVEGLSPNQKDHEFYM 386
            |:|.|||     ...|...||::|..|:.|.||::|.|||.:|.|...:.:|||:||:.:|..|:
  Rat   307 PDNHCFCTEKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLNPNEDEHRTYL 371

  Fly   387 VVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFF-PLVWFEQKVRITPDMAD-------- 442
            .|:|.||..|:.|.|.|||:||:|.:.|.....:.|.:. |::|..:...|..:.|:        
  Rat   372 DVEPITGFTLQFAKRLQVNILVKPARKIEALKNLKRPYIVPILWLNETGTIGDEKAEMFRNQVTG 436

  Fly   443 QLKVLPIVMLSGHIFAGICLIVGITLLCWTPVQILLASCRNR 484
            ::|:|.:|.:         :::|:.::.:....|...:||::
  Rat   437 KIKLLGLVEM---------VLLGVGVVMFVAFMISYCACRSK 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 21..476 CDD:460076 127/475 (27%)
Cd36l1NP_001102688.2 None

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