DRSC/TRiP Functional Genomics Resources

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Protein Alignment santa-maria and CG40006

DIOPT Version :10

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001036401.1 Gene:CG40006 / 3355123 FlyBaseID:FBgn0058006 Length:689 Species:Drosophila melanogaster


Alignment Length:521 Identity:132/521 - (25%)
Similarity:229/521 - (43%) Gaps:57/521 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NSAMWGQKS---NRKLIIGIFGFCLGLFGILCGMFWVDLFDWIMHKEMALAPDTRVYENWKSPPI 66
            |..:.|:::   .|..|:.:.||...:...|..:  ::.:|.|...::.:.....::..|..||:
  Fly    77 NEPIQGKRNRVPTRLFILLVIGFLAIITSTLIKV--LEPYDLIFKWKLIMTEGGEIFNLWAQPPV 139

  Fly    67 DLSLDIYLYNWTNPEDFGNLSTKPILEQVGPYRFIERPDKVDIHWHPENASVTYRRRSLFYFDAA 131
            ||.:.|||:|.||...|.....:..:||||||.:.|.....::.::..|...:.....|.:.:..
  Fly   140 DLYIKIYLFNITNANAFLAGREQLRVEQVGPYVYKEIMTHENVTFNSNNTMSSTPSHPLVWQEEM 204

  Fly   132 GSNGSLDDEITTLNAVALSAAATAKYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDAMI 196
            ..|...|||:..||...|:.:......|.:.|..:...|....:|..|:.:..|.:| ||..|:.
  Fly   205 SGNCREDDEVVMLNIAMLAISHLTANQPFLVRMALKTLLLSTKSEPIVRTTAKEFMF-GYPSALA 268

  Fly   197 DVAMA-MPIFGDEVKVPFDKFG-------------WFYTRNGSADLTGVFNVFTGADQLAKLGQM 247
            .:... :|.:     :.|:|.|             .|||...:..|:|::..:.|...|.:....
  Fly   269 TLGNTFLPNW-----ISFEKVGLIDRMYDFSTDFETFYTGVPNPALSGLYASYRGETTLPQWDGD 328

  Fly   248 HSWNYQ---ENTGFFDSYCGMTNGSAGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDIEG-L 308
            |..|.:   :.|.|                ...::|.::|..|...|||.|.|..|......| |
  Fly   329 HCSNIEFASDGTKF----------------KSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSL 377

  Fly   309 EGYKFSGGPRSVDNGTQYPENLCFC-GGQCVPSGVMNISSCRFGSPVFMSYPHFFNADPYYPDQV 372
            :||.:.....:.|||.....|.||| .|.|.|.|:::::.|.:|.|:.:|:|||.|.|......|
  Fly   378 KGYNYVFEDNAFDNGATNEANKCFCRKGDCQPVGLIDVTDCYYGFPISLSFPHFMNGDVGLQQNV 442

  Fly   373 EGLSPNQKDHEFYMVVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFFPLVWFEQKVRIT 437
            .|:||:...|....|:||.:|:||.::.:.|:||..:.:....:.:....:..|::|||..:...
  Fly   443 TGISPDPDKHSSTFVIQPESGLPLSLSVKVQINMHFKDLSNFPVVSVFNHLTVPMLWFEIMMSKL 507

  Fly   438 PDMADQ-----LKVLPIVMLSGHIFAGICLIVGITLLCWTPVQILLASCRNRRYDLRTKTKTNGQ 497
            ||..|.     |.:||:|...| .::||  ::||:||.:.   |..|:.....:..|....|:.:
  Fly   508 PDSLDSRFNFYLNILPLVNPLG-FWSGI--LLGISLLGYA---ITKATLHMSTFSRRAANITDVK 566

  Fly   498 Y 498
            |
  Fly   567 Y 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 21..476 CDD:460076 123/478 (26%)
CG40006NP_001036401.1 CD36 96..545 CDD:460076 123/478 (26%)

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