DRSC/TRiP Functional Genomics Resources

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Protein Alignment santa-maria and scav-6

DIOPT Version :9

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_492081.1 Gene:scav-6 / 184107 WormBaseID:WBGene00008542 Length:590 Species:Caenorhabditis elegans


Alignment Length:561 Identity:125/561 - (22%)
Similarity:212/561 - (37%) Gaps:154/561 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LFGILCGMFWVDLFDWIMHKEMALA--PDTRV-YE--NWKSPPIDLSLDIYLYNWTNPEDFGNLS 87
            :|||:....:..::..::.|.:.|.  .||.: |.  .:.||.:|..:..|.:|.|||::....|
 Worm    23 VFGIVTWAAFSSIYSTLVIKNLQLTENSDTSLGYSAFQYTSPQVDNIMKFYFFNVTNPDEVKYYS 87

  Fly    88 TKPILEQVGPYRFIERPDKVDIHWHPENASVTYR--RRSLFYFDAAGSNGSLDDEITTLNAVALS 150
            ..|.|.::||:..:|...|..:.:..:.:.:.|:  ::.:...|.:..:...|..|...|...|.
 Worm    88 AAPNLVEIGPFSVMESEQKKYLEFSDDKSQMFYQNYKKYILSKDYSCEDCDWDRNIVFPNPPGLG 152

  Fly   151 AAAT--------AKYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDAMID------VAMA 201
            |.|:        .|    ..|:::.|.|.:.|....|...:.|:||.||.||::.      |.:.
 Worm   153 AVASMLDPQFQITK----TGRTIIAVALTILGEYPFVSHKVREVLFDGYEDALLSAAHSGFVTVL 213

  Fly   202 MPIF----GDEVKVP---FDKFGWFYTRNGSADLTGVFNVFTGADQLAKLGQMHSWNYQENTGFF 259
            ..||    |..|.:|   ..|||:|...|.|.|  ..:.:.||...:.::|.:..|         
 Worm   214 SGIFKGDGGSIVPIPIPAMPKFGYFQGYNNSRD--EEYWIETGKKDINQIGNVQRW--------- 267

  Fly   260 DSYCGMT---------------NGS-AGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDIEGL 308
               .|:|               .|| :|.|...||....:..:|...|||:....:.:...||.:
 Worm   268 ---AGITELPGEWWTTPKARSIRGSDSGSFTQMHLDESSTADMFFSFMCRSFTKTFYQRETIESI 329

  Fly   309 E-------------------GYKFSGGPRSVDNGTQYPE-NLCFCGGQCVPSGVMNIS------- 346
            .                   |:::    |:::....:|: ..|...|||..||.::.|       
 Worm   330 PTIGYHIGYDEWDTTSDNNVGFRY----RNIEKRNYFPDWPKCPPKGQCHQSGSIDCSKSINFCH 390

  Fly   347 SCRFGS---------------------------PVFMSYPHFFNADPYYPDQVE----GLSPNQK 380
            :|..||                           .|..|.|||.    :.||:|.    |::||:.
 Worm   391 ACCDGSLYNGTYLLPPGMFPLVCYPGRLQPTPFAVVYSPPHFL----FSPDEVRTTVVGMAPNKS 451

  Fly   381 DHE---FYMVVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFFPLVWFEQKVR------- 435
            .||   :|.  :|.:|..|:|..|.||||.|.....:.....:|.:..||.|.:...:       
 Worm   452 LHEPMIYYH--EPYSGTTLKVVNRLQVNMPVIRSHDVPSSQNMPNVMIPLFWQDTSPKYHQFIFN 514

  Fly   436 -------ITPDMADQLKVLPIVMLSGHIFAGICLIVGITLL 469
                   :.|.:   ::||..|.|.    .|:.|:..|..|
 Worm   515 EVWLGFVLVPRL---MRVLQFVALG----IGLLLVAIIVFL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 23..474 CDD:279474 125/561 (22%)
scav-6NP_492081.1 CD36 18..547 CDD:279474 124/558 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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