DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment santa-maria and scav-5

DIOPT Version :9

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_509651.2 Gene:scav-5 / 181200 WormBaseID:WBGene00011076 Length:536 Species:Caenorhabditis elegans


Alignment Length:539 Identity:134/539 - (24%)
Similarity:217/539 - (40%) Gaps:114/539 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IFGFCLGLFGILCGM-----FWVDLFDWIMHKEMALAPD--------TRVYENWKSPPIDLSLDI 72
            |..|.:..|..|.|:     || .:|:..:.....|..:        ..:|.|   ||:...:..
 Worm     9 IISFVIAAFFFLSGLSMWIAFW-PIFNSELRSNYKLGANDDGSLHYAAFLYAN---PPMKNVMKF 69

  Fly    73 YLYNWTNPEDFGNLSTKPILEQVGPYRFIERPDKVDIHWHPENASVTYRRRSLFYF----DAAGS 133
            .|:|.|||::...|..||.|.:||.|.|:|...|....:..:...:.|:....:::    :.||.
 Worm    70 NLFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGY 134

  Fly   134 NGSLDDEITTLNAVALSAAATA----KYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDA 194
            |  .:|:|...|::|..|.:|.    ..:.|..:.||.:||.|.|....:.|::.::|..||.|.
 Worm   135 N--YNDKIMFPNSIAEGAVSTVFGPQSEFSPTAKILVSIGLVMLGEYPFISKTVKDVLMDGYEDP 197

  Fly   195 MIDVAMAMPIF---------GDEVK-VPFDK-FGWFYTRNGSADLTGVFNVFTGADQLAKLGQMH 248
            ::.||.: .||         |.::. :|..| |.:....|.|.|.....|  ||.:...|||.:.
 Worm   198 LLSVAHS-GIFISLVNFYGYGSQLNYIPEMKTFAYLSGYNNSYDENYWIN--TGYNDFNKLGFVE 259

  Fly   249 SWNYQEN--TGFFDS-----YCGMTNGSAGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDIE 306
            ||...|.  ..|:.:     ..|..:||..:.   ||...|.:..|...|||:....|.:...::
 Worm   260 SWAGLEQLPASFWPTLEARQIKGPDSGSLSKI---HLTKTDELPFFLSFMCRSFKRTYWQDGLVD 321

  Fly   307 GLEGYKFSGGPRSVDN------GTQY--PENLCFCGGQCVPSGVMNISSCR------FGSP---- 353
            |::...|:......|.      |.:|  .||:.:....|..:...::|.|:      |..|    
 Worm   322 GIKTMAFAVPYEEFDTTLEKNAGFRYKNQENVDYFPDWCDKNTTTSLSQCQKTANGTFLLPPGIF 386

  Fly   354 ---------------VFMSYPHFFNADPYYPDQVEGLSPNQKDHEFYMVVQPST-GIPLEVAARF 402
                           |.:|.|||..:.|.....:.|::|:.:.|:..:..|..| |..|:|..||
 Worm   387 PLVCYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDPEKHKPMVFHQEKTSGTALQVDVRF 451

  Fly   403 QVNMLVEPIQGISLYTGIPRIFFPL----------------VWFEQKVRITPDMADQLK-VLPIV 450
            |||:.|...:|..:.:.:|.:..||                ||.  .|.|.|.:.:.|| ||   
 Worm   452 QVNLPVVNNKGSIMSSQMPNVIIPLFYEDSHALVKDFVMDTVWL--GVIIVPRIIEYLKFVL--- 511

  Fly   451 MLSGHIFAGICLIVGITLL 469
                 ||..||::.  |||
 Worm   512 -----IFISICILT--TLL 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 23..474 CDD:279474 133/537 (25%)
scav-5NP_509651.2 CD36 15..524 CDD:279474 132/533 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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