DRSC/TRiP Functional Genomics Resources

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Protein Alignment santa-maria and Cd36

DIOPT Version :9

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_001153027.1 Gene:Cd36 / 12491 MGIID:107899 Length:472 Species:Mus musculus


Alignment Length:499 Identity:139/499 - (27%)
Similarity:246/499 - (49%) Gaps:55/499 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GQKSNRKLIIG-IFGFCLGLFGILCGMFWVDLFDWIMHKEMALAPDTRVYENWKSPPIDLSLDIY 73
            |...|..||.| :.|..|.:||.:.......|.:..:.:|:.|...|..::||......:....:
Mouse     2 GCDRNCGLIAGAVIGAVLAVFGGILMPVGDMLIEKTIKREVVLEEGTTAFKNWVKTGTTVYRQFW 66

  Fly    74 LYNWTNPEDFGNLSTKPILEQVGPYRF-IERPDKVDIHWHPENASVTYRRRSLFYFDAAGSNGSL 137
            :::..||:|....|:|..::|.|||.: :....|.:|...||:.:|::.:.:...|:.:.|.|:.
Mouse    67 IFDVQNPDDVAKNSSKIKVKQRGPYTYRVRYLAKENITQDPEDHTVSFVQPNGAIFEPSLSVGTE 131

  Fly   138 DDEITTLNAVALSAAATAKYWPPV-KRSLVDVGL----KMYGAEMSVQKSIDELLFTGYNDAMID 197
            ||..|.|| :|::||      |.: :.|.|.|.|    |...:.|...:|:.|||: ||.|..:.
Mouse   132 DDNFTVLN-LAVAAA------PHIYQNSFVQVVLNSLIKKSKSSMFQTRSLKELLW-GYKDPFLS 188

  Fly   198 VAMAMPIFGDEVKVPF---DKFGWFYTRNGSADLTGVFNVFTGADQLAKLGQMHSWNYQENTGFF 259
            :            ||:   ...|.||..|.:.|  ||:.||.|.|.::|:..:.|:..:.|..::
Mouse   189 L------------VPYPISTTVGVFYPYNDTVD--GVYKVFNGKDNISKVAIIESYKGKRNLSYW 239

  Fly   260 DSYCGMTNGSAGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDIEGLEGYKFSGGPRSVDNGT 324
            .|||.|.||:.....|..::...::..|:.|:||:|...:...:|::|:..|:|.....:..:..
Mouse   240 PSYCDMINGTDAASFPPFVEKSRTLRFFSSDICRSIYAVFGSEIDLKGIPVYRFVLPANAFASPL 304

  Fly   325 QYPENLCFC-----GGQCVPSGVMNISSCRFGSPVFMSYPHFFNADPYYPDQVEGLSPNQKDHEF 384
            |.|:|.|||     ...|...||::|..|:.|.||::|.|||.:|.|...:.:|||.||:.:|..
Mouse   305 QNPDNHCFCTEKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLHPNEDEHRT 369

  Fly   385 YMVVQPSTGIPLEVAARFQVNMLVEPIQGISLYTGIPRIFF-PLVWFEQKVRITPDMAD------ 442
            |:.|:|.||..|:.|.|.|||:||:|.:.|.....:.|.:. |::|..:...|..:.|:      
Mouse   370 YLDVEPITGFTLQFAKRLQVNILVKPARKIEALKNLKRPYIVPILWLNETGTIGDEKAEMFKTQV 434

  Fly   443 --QLKVLPIVMLSGHIFAGICLIVGITLLCWTPVQILLASCRNR 484
              ::|:|.:|.::         ::||.::.:....|...:|:::
Mouse   435 TGKIKLLGMVEMA---------LLGIGVVMFVAFMISYCACKSK 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 23..474 CDD:279474 132/473 (28%)
Cd36NP_001153027.1 CD36 16..463 CDD:366481 133/477 (28%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000269|PubMed:15748999 93..120 5/26 (19%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 1.030639 Normalized mean entropy S6187
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.760

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