DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5973 and AT1G72160

DIOPT Version :10

Sequence 1:NP_609120.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_177361.1 Gene:AT1G72160 / 843547 AraportID:AT1G72160 Length:490 Species:Arabidopsis thaliana


Alignment Length:330 Identity:60/330 - (18%)
Similarity:120/330 - (36%) Gaps:86/330 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SYDEHKLPYIDLGSAQIRMEKEQAPEWALKKAQDELREVPGVKEQAIKELRELIQNEKYLNLP-- 70
            |:.|......||.:::             ||:.|||:.:          :||.:.|.::.|.|  
plant   108 SFKEESSKLSDLSNSE-------------KKSLDELKHL----------VREALDNHQFTNTPEE 149

  Fly    71 --------LDDE----YMMMFLRPTHYYPESALKRLKNF--YHMKLKYGAACENIIPSKLRNVFE 121
                    |:|:    .::.|||...:..:.:...|||.  :..:.|.....|..:...|..|..
plant   150 VKIWGIPLLEDDRSDVVLLKFLRAREFKVKDSFAMLKNTIKWRKEFKIDELVEEDLVDDLDKVVF 214

  Fly   122 A------------NILNLLPQRDQHGRRLLVLEAGKKWKPSQVPLVDLFRGIQLTVLGSMVEPYS 174
            .            |:......::.:.:.....|..|.:..:::..::  |.|:.....|      
plant   215 MHGHDREGHPVCYNVYGEFQNKELYNKTFSDEEKRKHFLRTRIQFLE--RSIRKLDFSS------ 271

  Fly   175 QICGSVVII----DME---GLPLSHITQFTPSFAAMLLDYIQECICMRLKAVHIVNNSYIFNMLF 232
               |.|..|    ||:   ||....:...|.....:|.|...|.:..:.    .:|..:.:.:.:
plant   272 ---GGVSTIFQVNDMKNSPGLGKKELRSATKQAVELLQDNYPEFVFKQA----FINVPWWYLVFY 329

  Fly   233 AVFKPFIREKLRKRIFFHG--KDYKSLISHIEAKALPPKYGGSATWELPHGKVLGEFFECYSKDY 295
            .|..||:..:.:.::.|.|  :..::|..:|..:.:|.:|||.:.          :..:| :.|:
plant   330 TVIGPFMTPRSKSKLVFAGPSRSAETLFKYISPEQVPVQYGGLSV----------DPCDC-NPDF 383

  Fly   296 ELADS 300
            .|.||
plant   384 SLEDS 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_609120.1 CRAL_TRIO_N 51..96 CDD:215024 11/58 (19%)
SEC14 121..273 CDD:469559 28/172 (16%)
AT1G72160NP_177361.1 PRK11907 2..>97 CDD:237019
CRAL_TRIO_N 127..187 CDD:461043 14/69 (20%)
SEC14 202..372 CDD:469559 31/184 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.