DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and AT1G55840

DIOPT Version :10

Sequence 1:NP_609120.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_175980.1 Gene:AT1G55840 / 842034 AraportID:AT1G55840 Length:325 Species:Arabidopsis thaliana


Alignment Length:89 Identity:16/89 - (17%)
Similarity:40/89 - (44%) Gaps:23/89 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   783 TTAPPTIV------HVPDSSKQIAELSSKLDRMMDLMVAQSRQIEQLNVQLDAMKKARVEEQRKN 841
            |::.|.|:      |:|...:.:         .:..::.|.::|::||..:..:::..::.:.:|
plant    93 TSSRPLILSDKEQQHIPQGKESV---------QVKKILFQEKKIQKLNELVRDLRRQLLQCRNEN 148

  Fly   842 SATMNRFNQTLPKTIETQLSGLLV 865
            ...:..        :||:|..|||
plant   149 QVELTE--------LETELDQLLV 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_609120.1 CRAL_TRIO_N 51..96 CDD:215024
SEC14 121..273 CDD:469559
AT1G55840NP_175980.1 CRAL_TRIO_N 8..59 CDD:461043
SEC14 91..242 CDD:214706 16/89 (18%)
Blue background indicates that the domain is not in the aligned region.

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