DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5973 and AT1G22180

DIOPT Version :10

Sequence 1:NP_609120.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_173637.3 Gene:AT1G22180 / 838823 AraportID:AT1G22180 Length:314 Species:Arabidopsis thaliana


Alignment Length:233 Identity:46/233 - (19%)
Similarity:74/233 - (31%) Gaps:88/233 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GSTFQ-CYSISVLTKSYIDTTDLKASDIEEGGFKANDGEATITGSVFSDDGTTLALS--SSDGLI 242
            |.:|. |....:||:.     .|||....:.|       .||.|.:|. ||..|...  :::|.|
plant    13 GFSFDLCKRNDMLTQK-----GLKAPSFLKTG-------TTIVGLIFK-DGVILGADTRATEGPI 64

  Fly   243 RFYQVYQHANDRSPRRLHLWKPHDGKPITSFFFLDNYTETVNNKTIWKHAITCAENNAEIKVWCC 307
                    ..|::..::|...|:                                      ::||
plant    65 --------VADKNCEKIHYMAPN--------------------------------------IYCC 83

  Fly   308 ESWECLQTVRLTSPVEASLHFKAEIDISSTYLVLTERSTRQIYVLQVRKG-----QSAGSSAESE 367
            .:.....|..:|..|.:.|..         :...|.|.:|.:..|.:.|.     |...|:|   
plant    84 GAGTAADTEAVTDMVSSQLRL---------HRYQTGRDSRVVTALTLLKKHLFSYQGHVSAA--- 136

  Fly   368 PNKPTLSKGGTRSIVQPYIVSIAEYPL-SASVLGFSIL 404
                 |..||. .|..|::.:|  ||. |...|.|:.:
plant   137 -----LVLGGV-DITGPHLHTI--YPHGSTDTLPFATM 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_609120.1 CRAL_TRIO_N 51..96 CDD:215024
SEC14 121..273 CDD:469559 21/94 (22%)
AT1G22180NP_173637.3 CRAL_TRIO_N 25..70 CDD:215024 16/65 (25%)
SEC14 84..242 CDD:469559 23/103 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.