DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and AT3G24840

DIOPT Version :9

Sequence 1:NP_001162901.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001327840.1 Gene:AT3G24840 / 822082 AraportID:AT3G24840 Length:580 Species:Arabidopsis thaliana


Alignment Length:282 Identity:59/282 - (20%)
Similarity:113/282 - (40%) Gaps:59/282 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RMEKEQAPEWALKKAQDELREVPGVKEQAIKELRELIQNEKYLNL--PLDDEY--MMMFLRPTHY 85
            |:..:.|| ..::..:||      .:|:|:...|:.:.:   |:|  |..|:|  |:.||:...:
plant    59 RVADQYAP-IVIEDVRDE------EEEKAVNVFRKALVS---LDLLPPRHDDYHTMLRFLKARRF 113

  Fly    86 YPESALKRLKNFYHMKLKYGAACENIIPSKLRNVFEANILNLLPQR----DQHGRRLLVLEAGKK 146
            ..|..::..:.....:.:.|.  :.||...:.:.:| .:....|..    |:.||.:.:...||.
plant   114 DLEKTVQMWEEMLKWRKENGV--DTIIQDFVYDEYE-EVQQYYPHGYHGVDREGRPVYIERLGKI 175

  Fly   147 WKPSQVPLVDLFRGIQLTVLGSMVEPYSQ------------ICGSVVIIDMEGLPLSHITQFTPS 199
            .....:.:..|.|.::..|.| ..:.:|:            |..|..|||:.|:...       |
plant   176 DPGKLMKVTTLERFLRYHVQG-FEKTFSEKFPACSIAAKRHINSSTTIIDVHGVSWM-------S 232

  Fly   200 FAAMLLDYIQECICMRLKAV------------HIVNNSYIFNMLFAVFKPFIREKLRKRIFFHGK 252
            |..:..|.:     ||::.:            :|:|....|.:::...|.|:..|...:|...|.
plant   233 FRKLAQDLV-----MRMQKIDGDNYPETLNQMYIINAGNGFKLVWNTVKGFLDPKTTSKIHVLGN 292

  Fly   253 DYKS-LISHIEAKALPPKYGGS 273
            .|:| |:..|:...||...||:
plant   293 KYRSHLLEIIDPSELPEFLGGN 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_001162901.1 CRAL_TRIO_N 51..96 CDD:215024 12/48 (25%)
SEC14 116..272 CDD:238099 37/184 (20%)
AT3G24840NP_001327840.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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