DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and Clvs1

DIOPT Version :9

Sequence 1:NP_001162901.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001342112.1 Gene:Clvs1 / 74438 MGIID:1921688 Length:354 Species:Mus musculus


Alignment Length:282 Identity:80/282 - (28%)
Similarity:136/282 - (48%) Gaps:28/282 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LKKAQDELREVPGVKEQAIKELRELIQNEKYLN-LPLDDEYMMMFLRPTHYYPESALKRLKNFYH 99
            ::||:.||.|.|.:..|.|:::|::|.....:. |..||.:::.|||...::...|.:.|..::.
Mouse    35 IEKARLELNENPDILHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQ 99

  Fly   100 MK------LKYGAACENIIPSKLRNVFEANILNLLPQRDQHGRRLLVLEAGKKWKPSQVPLVDLF 158
            .:      .|...|.:..|...|.:.|.    .:|..||.:||::|:|.|. .|..|:....|:.
Mouse   100 YRQLNLDMFKNFKADDPGIKRALIDGFP----GVLENRDHYGRKILLLFAA-NWDQSRNSFTDIL 159

  Fly   159 RGIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQFTPSFAAMLLDYIQECICMRLKAVHIVN 223
            |.|.|::...:.:|..||.|.::|||.........::.|||...:.::.:|:....|...||.||
Mouse   160 RAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVN 224

  Fly   224 NSYIFNMLFAVFKPFIREKLRKRIFFHGKDYKSLISHIEAKALPPKYGGS------ATWELPHGK 282
            ..:..:.|:.:.|||:::|.|||||.||.:..||...|..:.||.::||:      .||.   ..
Mouse   225 QPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGGTLPPYDMGTWA---RT 286

  Fly   283 VLGEFFECYSKDYELADSYGYT 304
            :||       .||...:.|.:|
Mouse   287 LLG-------PDYSDENDYTHT 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_001162901.1 CRAL_TRIO_N 51..96 CDD:215024 12/45 (27%)
SEC14 116..272 CDD:238099 49/155 (32%)
Clvs1NP_001342112.1 CRAL_TRIO_N 51..97 CDD:215024 12/45 (27%)
CRAL_TRIO 125..274 CDD:366224 49/153 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59833
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8767
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.830

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