DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and clvs2

DIOPT Version :10

Sequence 1:NP_609120.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001020716.1 Gene:clvs2 / 566769 ZFINID:ZDB-GENE-041014-313 Length:329 Species:Danio rerio


Alignment Length:259 Identity:79/259 - (30%)
Similarity:130/259 - (50%) Gaps:19/259 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 APEWALKKAQDELREVPGVKEQAIKELRELIQNEKYLN-LPLDDEYMMMFLRPTHYYPESALKRL 94
            :|| .|:||:.||:|.|....|.|:|:|::|.....:. |..||.:::.|||...:....|.:.|
Zfish     9 SPE-TLEKAKVELKENPDTLHQDIQEVRDMIITRPDIGFLRTDDAFILRFLRARKFNHFEAFRLL 72

  Fly    95 KNFYHMK------LKYGAACENIIPSKLRNVFEANILNLLPQRDQHGRRLLVLEAGKKWKPSQVP 153
            ..::..:      .|...|.:..|...|::.|...:.||    |::||::|||.|. .|..|:..
Zfish    73 AQYFEYRQQNLDMFKNLKATDPGIKQALKDGFPGVLSNL----DRYGRKILVLFAA-NWDQSRYT 132

  Fly   154 LVDLFRGIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQFTPSFAAMLLDYIQECICMRLKA 218
            .||:.|.|.|::...:.:|..|:.|.|:|||.........::.|||...:.::.:|:....|...
Zfish   133 FVDILRAILLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGG 197

  Fly   219 VHIVNNSYIFNMLFAVFKPFIREKLRKRIFFHGKDYKSLISHIEAKALPPKYGG------SATW 276
            :|.||..:..:.|:.|.:||:::|.|||||.||.:..||...|..:.||.:.||      ..||
Zfish   198 IHFVNQPWYIHALYTVIRPFLKDKTRKRIFMHGNNLNSLHQLILPEILPSELGGMLPPYDMGTW 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_609120.1 CRAL_TRIO_N 51..96 CDD:215024 13/45 (29%)
SEC14 121..273 CDD:469559 50/157 (32%)
clvs2NP_001020716.1 CRAL_TRIO_N 29..75 CDD:215024 13/45 (29%)
SEC14 101..251 CDD:469559 49/154 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..329
Blue background indicates that the domain is not in the aligned region.

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