DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5973 and Ttpa

DIOPT Version :10

Sequence 1:NP_609120.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_056582.1 Gene:Ttpa / 50500 MGIID:1354168 Length:278 Species:Mus musculus


Alignment Length:276 Identity:79/276 - (28%)
Similarity:133/276 - (48%) Gaps:18/276 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EQAPEWALKKAQDELREVPGVKEQAIKELRELIQNE--KYLNLPLDDEYMMMFLRPTHYYPESAL 91
            |..|...:.|..:||.:...:.:..:.|||..:|..  .....||.|.:::.|||...:..:.|.
Mouse     3 EMRPGPLVGKQLNELPDHSPLLQPGLAELRRRVQEAGVPQTPQPLTDAFLLRFLRARDFDLDLAW 67

  Fly    92 KRLKNFYHMKLKYGAAC----ENIIPSKLRNVFEANILNLLPQRDQHGRRLLVLEAGKKWKPSQV 152
            :.:||:|    |:.|.|    .::.|..:..:.:|....:|..||..|.|:|:.... .|.|...
Mouse    68 RLMKNYY----KWRAECPELSADLRPRSILGLLKAGYHGVLRSRDSTGSRVLIYRIA-YWDPKVF 127

  Fly   153 PLVDLFRGIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQFTPSFAAMLLDYIQECICMRLK 217
            ...|:||...:|....:.|..:|..|...|.|:||..:||..|.|||.|..:...:.:...::::
Mouse   128 TAYDVFRVSLITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKKIAAVLTDSFPLKVR 192

  Fly   218 AVHIVNNSYIFNMLFAVFKPFIREKLRKRIFFHGKDYK-SLISHIEAKALPPKYGGSATWELPHG 281
            .:|::|...||:.:|::.|||:.||::.||..||.:|| |::.|. ...||.:|||.   |....
Mouse   193 GIHLINEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHF-PDILPREYGGK---EFSME 253

  Fly   282 KVLGEF--FECYSKDY 295
            .:..|:  |...|:||
Mouse   254 DICQEWTNFIMKSEDY 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_609120.1 CRAL_TRIO_N 51..96 CDD:215024 11/46 (24%)
SEC14 121..273 CDD:469559 49/152 (32%)
TtpaNP_056582.1 CRAL_TRIO_N 25..73 CDD:215024 12/47 (26%)
CRAL_TRIO 99..247 CDD:459890 47/149 (32%)

Return to query results.
Submit another query.