DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and Sec14l4

DIOPT Version :9

Sequence 1:NP_001162901.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001102560.1 Gene:Sec14l4 / 498399 RGDID:1565810 Length:412 Species:Rattus norvegicus


Alignment Length:261 Identity:57/261 - (21%)
Similarity:114/261 - (43%) Gaps:61/261 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KEQAIKELRELIQNEKYLNLP-LDDEYMMMFLRPTHYYPESALKRLKNFYHMKLKYGAACENII- 112
            :::|:...||::| :....|| .||.:::.:||..::..:.:...|:.  |::.:.....::|: 
  Rat    12 QQEALTRFREILQ-DVLPTLPKADDFFLLRWLRARNFDLKKSEDMLRK--HVEFRNQQDLDHILT 73

  Fly   113 --PSKLRNVFEANIL------------NLLPQRDQHGRRLLVLEAGKKWKPSQVPLVDLFR---- 159
              |.::..::::..|            :|:...|..|   |.:.|.|:         ||.|    
  Rat    74 WQPPEVIRLYDSGGLCGYDYEGCPVWFDLIGTLDPKG---LFMSASKQ---------DLIRKRIK 126

  Fly   160 ---------GIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQ-----FTPSFAAMLLDYIQE 210
                     .:|...||..||      ..|::.|||||.|.|:.:     :...||.:..:|.: 
  Rat   127 VCEMLLHECELQSQKLGRKVE------RMVMVFDMEGLSLRHLWKPAVEVYQQFFAILEANYPE- 184

  Fly   211 CICMRLKAVHIVNNSYIFNMLFAVFKPFIREKLRKRIFFHGKDYK-SLISHIEAKALPPKYGGSA 274
                .:|.:.::....:|.:.|.:.|.||.|..:|:|...|.::| .|:..:....||.::||:.
  Rat   185 ----TVKNLIVIRAPKLFPVAFNLVKSFIGEVTQKKIVILGGNWKQELLKFMSPDQLPVEFGGTM 245

  Fly   275 T 275
            |
  Rat   246 T 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_001162901.1 CRAL_TRIO_N 51..96 CDD:215024 11/45 (24%)
SEC14 116..272 CDD:238099 40/186 (22%)
Sec14l4NP_001102560.1 CRAL_TRIO_N 13..59 CDD:215024 11/48 (23%)
SEC14 76..244 CDD:214706 42/190 (22%)
GOLD_2 284..379 CDD:404736
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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