DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and rlbp1a

DIOPT Version :9

Sequence 1:NP_001162901.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:291 Identity:75/291 - (25%)
Similarity:133/291 - (45%) Gaps:41/291 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GSAQIRMEKEQA-----------------------PEWALKKAQDELREVPGVKEQAIKELRELI 61
            ||.::..|:|||                       |:...:||:|||.|....:..||||||.:|
Zfish     5 GSFRMVSEEEQALRAKLEHLTVKDHGPVYGPCMKLPDHTKQKAKDELNETDEKRASAIKELRAMI 69

  Fly    62 QN-------------EKYLNLPLDDEYMMMFLRPTHYYPESALKRLKNFYHMKLKYGAACENIIP 113
            ::             :|:...|  |..::.|:|...:....|.:.:|.:...:..|....||:.|
Zfish    70 KDKAGQGDEVAKTVQDKFGKEP--DSLLLRFIRARKFDVARAHELMKGYVRFRRDYPELFENLTP 132

  Fly   114 SKLRNVFEANILNLLPQRDQHGRRLLVLEAGKKWKPSQVPLVDLFRGIQLTVLGSMVE-PYSQIC 177
            ..:|:..||....:|..||::||.:|:... ..|...:|...:..|. ...:|..::| ..:||.
Zfish   133 EAVRSTIEAGYPRILSTRDKNGRVVLLFNI-DNWDLEEVTFDETLRA-YCVILEKLLENEETQIN 195

  Fly   178 GSVVIIDMEGLPLSHITQFTPSFAAMLLDYIQECICMRLKAVHIVNNSYIFNMLFAVFKPFIREK 242
            |.|:|.:.:|..:.|.:....:....::|.:|:....|.||||:::..:.|...:.|.|||::.|
Zfish   196 GFVLIENFKGFTMQHASGIKHTELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSK 260

  Fly   243 LRKRIFFHGKDYKSLISHIEAKALPPKYGGS 273
            |.:|:|.||.:....:....|:.|||.:.|:
Zfish   261 LLERVFVHGDELDGYLRDFGAEILPPDFDGT 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_001162901.1 CRAL_TRIO_N 51..96 CDD:215024 13/57 (23%)
SEC14 116..272 CDD:238099 43/156 (28%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 14/58 (24%)
CRAL_TRIO 142..291 CDD:279044 40/150 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8432
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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