DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5973 and ctg-2

DIOPT Version :9

Sequence 1:NP_001162901.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001254156.1 Gene:ctg-2 / 174360 WormBaseID:WBGene00011756 Length:408 Species:Caenorhabditis elegans


Alignment Length:278 Identity:58/278 - (20%)
Similarity:110/278 - (39%) Gaps:60/278 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EVPGVKEQAIKELRELIQNEKYLNLPLDDEYMMM-------------------FLRPTHY--YPE 88
            |:.....:.:.|||:.|..|..|....||::.:|                   .||..|.  ..:
 Worm    19 EITESDRKLLDELRKRIHKELELVKEYDDDFSLMRWLIGWDRKIDVVVPKIKFSLRAIHALGLDQ 83

  Fly    89 SALKRLKNFYHMKLKYGAACEN------IIPSKLRNV-FEANILNLLPQRDQHGRRLLVLEAGKK 146
            ..|..|:       |....|::      .:|..|..: .|.|:::|  |...|      |:|.  
 Worm    84 EDLSTLE-------KVAQKCDDCSVPLRYLPGSLIGLDHENNVVSL--QMIGH------LDAA-- 131

  Fly   147 WKPSQVPLV---DLFR-------GIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQFTPSFA 201
               ..:|..   ||:|       |: :.::..|.:...:..|:.||.|::||.:..|........
 Worm   132 ---GLMPATRNSDLYRMRIAESEGV-MQIIRKMEKEQGKPLGTSVIFDLDGLSMVQIDLAALKVV 192

  Fly   202 AMLLDYIQECICMRLKAVHIVNNSYIFNMLFAVFKPFIREKLRKRIFFHGKDYKS-LISHIEAKA 265
            ..:|..:||.....::.:.|||......:|:::..|.:.::.::::...|.|:|. |..:|..:.
 Worm   193 TTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLAKQTQQKVKILGNDWKQHLKENIGEEV 257

  Fly   266 LPPKYGGSATWELPHGKV 283
            |..::||:...|..:|.|
 Worm   258 LFERWGGTRKAETEYGNV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_001162901.1 CRAL_TRIO_N 51..96 CDD:215024 14/65 (22%)
SEC14 116..272 CDD:238099 35/167 (21%)
ctg-2NP_001254156.1 SEC14 98..267 CDD:214706 38/182 (21%)
EMP24_GP25L 331..>405 CDD:279450
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.