DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5973 and sec14l3

DIOPT Version :9

Sequence 1:NP_001162901.1 Gene:CG5973 / 34023 FlyBaseID:FBgn0031914 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001120265.1 Gene:sec14l3 / 100145318 XenbaseID:XB-GENE-951877 Length:410 Species:Xenopus tropicalis


Alignment Length:252 Identity:54/252 - (21%)
Similarity:107/252 - (42%) Gaps:40/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KEQAIKELRELIQNEKYL--NLP---LDDEYMMMFLRPTHYYPESALKRLKNFYHMKLKYGAACE 109
            :|:|:.:.||   |.|.|  .||   .||.:::.:||...:..:.|...|:.  :::.:.....:
 Frog    12 QEEALVKFRE---NVKDLMPRLPPFSQDDYFLLRWLRARSFNLQKAENMLRK--NVEFRKQMDSD 71

  Fly   110 NII-----PSKLRNVFEANI-----------LNLLPQRDQHGRRLLVLEAGK----KWKPSQVPL 154
            |::     |..::......:           .:::...|..|   |:..|.|    |.|.....:
 Frog    72 NVLEKWQPPEVVQKYLSGGLCGHDREDSPIWYDVIGPLDPKG---LLFSASKQDLMKTKMRDCEV 133

  Fly   155 VDLFRGIQLTVLGSMVEPYSQICGSVVIIDMEGLPLSHITQFTPSFAAMLLDYIQECICMRLKAV 219
            :.....:|...||..||..      |:|.|:|||.|.|:.:........:|...::.....||.:
 Frog   134 LHHACRMQSEKLGKRVEDV------VMIYDVEGLGLKHLWKPAVELYGEILQMFEDNYPEALKRL 192

  Fly   220 HIVNNSYIFNMLFAVFKPFIREKLRKRIFFHGKDYKSLI-SHIEAKALPPKYGGSAT 275
            .::....:|.:.:.:.|.|:.|..|::|...|.:::.:: .:|..:.||..|||:.|
 Frog   193 FVIKAPKLFPVAYNLIKHFLSEDTRRKIMVLGDNWQDVLKKYIAPEELPQYYGGTLT 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5973NP_001162901.1 CRAL_TRIO_N 51..96 CDD:215024 15/49 (31%)
SEC14 116..272 CDD:238099 34/171 (20%)
sec14l3NP_001120265.1 CRAL_TRIO_N 13..60 CDD:215024 15/49 (31%)
SEC14 79..248 CDD:214706 37/177 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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