DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and PATL2

DIOPT Version :10

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_173669.1 Gene:PATL2 / 838859 AraportID:AT1G22530 Length:683 Species:Arabidopsis thaliana


Alignment Length:267 Identity:56/267 - (20%)
Similarity:100/267 - (37%) Gaps:64/267 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 YLKPETVEIARVELRETEEVKAEAIIKLRELLKATPELNYKDDDAFLTVFLRACHFYPEGALEKM 81
            |::||.|.|..:.|.|.|.                       .|..|..||||..|..:.|...:
plant   345 YVEPEEVSIWGIPLLEDER-----------------------SDVILLKFLRARDFKVKEAFTML 386

  Fly    82 KTTASFRKEYASLVRGLLVEQVKEKFVKGSVINVL---KNCDQKGRRVLIVNCGKLWDPSDITSD 143
            |.|..:|||..       ::.:..:.::||....|   ...|::|..|:..:.|: :...:|.||
plant   387 KNTVQWRKENK-------IDDLVSEDLEGSEFEKLVFTHGVDKQGHVVIYSSYGE-FQNKEIFSD 443

  Fly   144 E-------MFRMLYMVHLAAQLEEETQVR-GVVCIMDFE---GLSMKQVKALSPSFSKRLLTFIQ 197
            :       .:|:.:.......|:...:.: ..|.:.||.   ||..:.:.    .|.||.:...:
plant   444 KEKLSKFLKWRIQFQEKCVRSLDFSPEAKSSFVFVSDFRNAPGLGQRALW----QFIKRAVKQFE 504

  Fly   198 EAMPLRMKEVHFVKQPFIFNMVW---SLFKPF----VKQKLNNRMHFHG--SDMKSLQKFLDPSV 253
            :..|      .||.:....|:.|   ..:|.|    ...:..::|...|  ...:::.|::.|.|
plant   505 DNYP------EFVAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLSGPSKSAETIFKYVAPEV 563

  Fly   254 LPANYKG 260
            :|..|.|
plant   564 VPVKYGG 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 8/43 (19%)
CRAL_TRIO 111..260 CDD:459890 33/171 (19%)
PATL2NP_173669.1 rne <165..354 CDD:236766 4/8 (50%)
CRAL_TRIO_N <357..389 CDD:215024 12/54 (22%)
SEC14 419..573 CDD:214706 32/163 (20%)

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