DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and rlbp1

DIOPT Version :9

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:266 Identity:95/266 - (35%)
Similarity:147/266 - (55%) Gaps:17/266 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RLGYLKPETVEIARVELRETEEVKAEAIIKLR-----------ELLKATPE-LNYKDDDAFLTVF 66
            :.|.|...|::.|:.||.||||.:..|:.:||           ||.||..: :..|.||.||. |
 Frog    36 KCGKLPEYTIQKAKDELNETEEKRESAVKELRALVQEKANAGEELCKAVADKVKDKGDDFFLR-F 99

  Fly    67 LRACHFYPEGALEKMKTTASFRKEYASLVRGLLVEQVKEKFVKGSVINVLKNCDQKGRRVLIVNC 131
            :||..|....|.|.:|...:||::|..|...|..|.|:.. ::.....:|.:.|:.||.:|:.|.
 Frog   100 IRARKFDVSRAYELLKGYVNFRQQYPELFEDLTPEAVRST-IEAGYPGILTSRDKNGRVILLFNI 163

  Fly   132 GKLWDPSDITSDEMFRMLYMVHLAAQLE-EETQVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTF 195
             :.||..:||.||:.| .|.:.|.:.|| ||||:.|...|.:|:|.:|:|...:.||..|:::..
 Frog   164 -ESWDYEEITFDEILR-AYCIILESLLENEETQINGFCIIENFKGFTMQQASGIKPSELKKMVDM 226

  Fly   196 IQEAMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSDMKSLQKFLDPSVLPANYKG 260
            :|::.|.|.|.|||:.||:.|...:::.|||:|.||..|:..||.|::...|.:|..:|||::.|
 Frog   227 LQDSFPARFKAVHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADILPADFGG 291

  Fly   261 TLPAID 266
            .||..|
 Frog   292 NLPKYD 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 18/55 (33%)
CRAL_TRIO 111..261 CDD:279044 55/150 (37%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 19/57 (33%)
CRAL_TRIO 143..292 CDD:306996 55/150 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H68046
Inparanoid 1 1.050 153 1.000 Inparanoid score I4232
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 1 1.000 - - FOG0000233
OrthoInspector 1 1.000 - - mtm9431
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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