DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and rlbp1b

DIOPT Version :10

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_991253.1 Gene:rlbp1b / 402990 ZFINID:ZDB-GENE-040426-1870 Length:307 Species:Danio rerio


Alignment Length:280 Identity:89/280 - (31%)
Similarity:143/280 - (51%) Gaps:30/280 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EEAFHLRLGYLK--------------PE-TVEIARVELRETEEVKAEAIIKLR-----------E 46
            |:|...:|.:|.              |: |::.|:.||.||:|.:..|:.:||           |
Zfish    15 EQALRAKLEHLTVKDHGPVFEASTKVPDHTMQKAKDELNETDEKRTSAVKELRGIIKEKAETGDE 79

  Fly    47 LLKATPELNYKDDDAFLTVFLRACHFYPEGALEKMKTTASFRKEYASLVRGLLVEQVKEKFVKGS 111
            |.|...:...:..|..|..|:||..:....|.|.||....||::|..|...|..|.|:.. ::..
Zfish    80 LAKGVQDTFGEKPDGVLVRFIRARKYDVNRAYELMKGYVRFRRDYPELFENLTPEAVRST-IEAG 143

  Fly   112 VINVLKNCDQKGRRVLIVNCGKLWDPSDITSDEMFRMLYMVHLAAQLE-EETQVRGVVCIMDFEG 175
            ...:|.:.|:.||.||:.|. :.||..:||.||:.| .|.|.|...|| ||||:.|...|.:|:|
Zfish   144 YPGILSSRDKYGRVVLLFNI-ENWDYEEITFDEILR-AYCVILEKLLENEETQINGFCIIENFKG 206

  Fly   176 LSMKQVKALSPSFSKRLLTFIQEAMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGS 240
            .:|:|...:.|:..|:::..:|::.|.|.|.|||:.||:.|...:::.||.:|.||..|:..||.
Zfish   207 FTMQQASGIKPTELKKMVDMLQDSFPARFKAVHFIHQPWYFTTTYNVVKPLMKSKLLERVFVHGD 271

  Fly   241 DMKSLQKFLDPSVLPANYKG 260
            |:::..|..|..:||:::.|
Zfish   272 DLENYFKEFDAEILPSDFDG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 13/54 (24%)
CRAL_TRIO 111..260 CDD:459890 54/149 (36%)
rlbp1bNP_991253.1 CRAL_TRIO_N 60..117 CDD:215024 15/56 (27%)
SEC14 141..292 CDD:469559 55/153 (36%)

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