DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and rlbp1b

DIOPT Version :9

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_991253.1 Gene:rlbp1b / 402990 ZFINID:ZDB-GENE-040426-1870 Length:307 Species:Danio rerio


Alignment Length:280 Identity:89/280 - (31%)
Similarity:143/280 - (51%) Gaps:30/280 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EEAFHLRLGYLK--------------PE-TVEIARVELRETEEVKAEAIIKLR-----------E 46
            |:|...:|.:|.              |: |::.|:.||.||:|.:..|:.:||           |
Zfish    15 EQALRAKLEHLTVKDHGPVFEASTKVPDHTMQKAKDELNETDEKRTSAVKELRGIIKEKAETGDE 79

  Fly    47 LLKATPELNYKDDDAFLTVFLRACHFYPEGALEKMKTTASFRKEYASLVRGLLVEQVKEKFVKGS 111
            |.|...:...:..|..|..|:||..:....|.|.||....||::|..|...|..|.|:.. ::..
Zfish    80 LAKGVQDTFGEKPDGVLVRFIRARKYDVNRAYELMKGYVRFRRDYPELFENLTPEAVRST-IEAG 143

  Fly   112 VINVLKNCDQKGRRVLIVNCGKLWDPSDITSDEMFRMLYMVHLAAQLE-EETQVRGVVCIMDFEG 175
            ...:|.:.|:.||.||:.|. :.||..:||.||:.| .|.|.|...|| ||||:.|...|.:|:|
Zfish   144 YPGILSSRDKYGRVVLLFNI-ENWDYEEITFDEILR-AYCVILEKLLENEETQINGFCIIENFKG 206

  Fly   176 LSMKQVKALSPSFSKRLLTFIQEAMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGS 240
            .:|:|...:.|:..|:::..:|::.|.|.|.|||:.||:.|...:::.||.:|.||..|:..||.
Zfish   207 FTMQQASGIKPTELKKMVDMLQDSFPARFKAVHFIHQPWYFTTTYNVVKPLMKSKLLERVFVHGD 271

  Fly   241 DMKSLQKFLDPSVLPANYKG 260
            |:::..|..|..:||:::.|
Zfish   272 DLENYFKEFDAEILPSDFDG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 13/54 (24%)
CRAL_TRIO 111..261 CDD:279044 55/151 (36%)
rlbp1bNP_991253.1 CRAL_TRIO_N 60..117 CDD:215024 15/56 (27%)
CRAL_TRIO 143..292 CDD:279044 55/151 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 1 1.000 - - FOG0000233
OrthoInspector 1 1.000 - - mtm8432
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10687
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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