DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and rlbp1a

DIOPT Version :9

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:299 Identity:96/299 - (32%)
Similarity:147/299 - (49%) Gaps:36/299 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAATD----IAEE--AFHLRLGYLK--------------PE-TVEIARVELRETEEVKAEAIIKL 44
            ||||.    ::||  |...:|.:|.              |: |.:.|:.||.||:|.:|.||.:|
Zfish     1 MAATGSFRMVSEEEQALRAKLEHLTVKDHGPVYGPCMKLPDHTKQKAKDELNETDEKRASAIKEL 65

  Fly    45 R-----------ELLKATPELNYKDDDAFLTVFLRACHFYPEGALEKMKTTASFRKEYASLVRGL 98
            |           |:.|...:...|:.|:.|..|:||..|....|.|.||....||::|..|...|
Zfish    66 RAMIKDKAGQGDEVAKTVQDKFGKEPDSLLLRFIRARKFDVARAHELMKGYVRFRRDYPELFENL 130

  Fly    99 LVEQVKEKFVKGSVINVLKNCDQKGRRVLIVNCGKLWDPSDITSDEMFRMLYMVHLAAQLE-EET 162
            ..|.|:.. ::.....:|...|:.||.||:.|... ||..::|.||..| .|.|.|...|| |||
Zfish   131 TPEAVRST-IEAGYPRILSTRDKNGRVVLLFNIDN-WDLEEVTFDETLR-AYCVILEKLLENEET 192

  Fly   163 QVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTFIQEAMPLRMKEVHFVKQPFIFNMVWSLFKPFV 227
            |:.|.|.|.:|:|.:|:....:..:..|:::..:|::.|.|.|.||.:.||:.|...:::.|||:
Zfish   193 QINGFVLIENFKGFTMQHASGIKHTELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFM 257

  Fly   228 KQKLNNRMHFHGSDMKSLQKFLDPSVLPANYKGTLPAID 266
            |.||..|:..||.::....:.....:||.::.||.||.|
Zfish   258 KSKLLERVFVHGDELDGYLRDFGAEILPPDFDGTGPACD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 16/54 (30%)
CRAL_TRIO 111..261 CDD:279044 49/150 (33%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 18/56 (32%)
CRAL_TRIO 142..291 CDD:279044 49/150 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 1 1.000 - - FOG0000233
OrthoInspector 1 1.000 - - mtm8432
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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