DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5958 and Clvs1

DIOPT Version :9

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:291 Identity:90/291 - (30%)
Similarity:153/291 - (52%) Gaps:23/291 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DIAEEAFHLRLGYLKPETVEIARVELRETEEVKAEAIIKLRELLKATPELNY-KDDDAFLTVFLR 68
            |:|:.. ||:.| |.|:|:|.||:||.|..:|..:.|.::|:::...|::.: :.||||:..|||
  Rat    19 DLAKMT-HLQAG-LSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLR 81

  Fly    69 ACHFYPEGALEKMKTTASFRKEYASLVRGLLVEQ--VKEKFVKGSVINVLKNCDQKGRRVLIVNC 131
            |..|:...|...:.....:|:....:.:....:.  :|...:.| ...||:|.|..||::|::..
  Rat    82 ARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDG-FPGVLENRDHYGRKILLLFA 145

  Fly   132 GKLWDPSDITSDEMFRMLYMVHLAAQLEE-ETQVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTF 195
            .. ||.|..:..::.|.: ::.|...:|: |.|:.|.:.|:|:...|.||...|:||..|..:..
  Rat   146 AN-WDQSRNSFTDILRAI-LLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEG 208

  Fly   196 IQEAMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSDMKSLQKFLDPSVLPANYKG 260
            :|::.|.|...||||.||:..:.:::|.|||:|.|...|:..||:::.||.:.:.|..||:.:.|
  Rat   209 LQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

  Fly   261 TLPAIDYGGVEWFPALEQQAQYVEEWSQLGP 291
            |||..|.|  .|...|            |||
  Rat   274 TLPPYDMG--TWARTL------------LGP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 13/44 (30%)
CRAL_TRIO 111..261 CDD:279044 48/150 (32%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 13/45 (29%)
CRAL_TRIO 125..274 CDD:395525 49/151 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59833
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 1 1.000 - - FOG0000233
OrthoInspector 1 1.000 - - mtm9153
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.