DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and Clvs1

DIOPT Version :10

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:293 Identity:89/293 - (30%)
Similarity:154/293 - (52%) Gaps:27/293 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DIAEEAFHLRLGYLKPETVEIARVELRETEEVKAEAIIKLRELLKATPELNY-KDDDAFLTVFLR 68
            |:|:.. ||:.| |.|:|:|.||:||.|..:|..:.|.::|:::...|::.: :.||||:..|||
  Rat    19 DLAKMT-HLQAG-LSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLR 81

  Fly    69 ACHFYPEGALEKMKTTASFRKEYASLVRGLLVEQ--VKEKFVKGSVINVLKNCDQKGRRVLIVNC 131
            |..|:...|...:.....:|:....:.:....:.  :|...:.| ...||:|.|..||::|::..
  Rat    82 ARKFHQADAFRLLAQYFQYRQLNLDMFKNFKADDPGIKRALIDG-FPGVLENRDHYGRKILLLFA 145

  Fly   132 GKLWDPSDITSDEMFRMLYMVHLAAQLEE-ETQVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTF 195
            .. ||.|..:..::.|.: ::.|...:|: |.|:.|.:.|:|:...|.||...|:||..|..:..
  Rat   146 AN-WDQSRNSFTDILRAI-LLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEG 208

  Fly   196 IQEAMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSDMKSLQKFLDPSVLPANYKG 260
            :|::.|.|...||||.||:..:.:::|.|||:|.|...|:..||:::.||.:.:.|..||:.:.|
  Rat   209 LQDSFPARFGGVHFVNQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

  Fly   261 TLPAIDYGGVEWFPALEQQAQYVEEWSQ--LGP 291
            |||..|.|                .|::  |||
  Rat   274 TLPPYDMG----------------TWARTLLGP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 13/44 (30%)
CRAL_TRIO 111..260 CDD:459890 48/149 (32%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 13/45 (29%)
SEC14 123..274 CDD:469559 49/153 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.

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