DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5958 and Clvs2

DIOPT Version :10

Sequence 1:NP_609119.2 Gene:CG5958 / 34022 FlyBaseID:FBgn0031913 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001397251.1 Gene:Clvs2 / 361459 RGDID:1306801 Length:327 Species:Rattus norvegicus


Alignment Length:290 Identity:86/290 - (29%)
Similarity:156/290 - (53%) Gaps:24/290 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HLRLGYLKPETVEIARVELRETEEVKAEAIIKLRELLKATPELNY-KDDDAFLTVFLRACHFYPE 75
            ||:.| |.|||:|.||:||.|..:...:.|.::|:::...|::.: :.||||:..||||..|:..
  Rat     3 HLQAG-LSPETLEKARLELNENPDTLHQDIQEVRDMVITRPDIGFLRTDDAFILRFLRARKFHHF 66

  Fly    76 GALEKMKTTASFRKEYASLVRGL------LVEQVKEKFVKGSVINVLKNCDQKGRRVLIVNCGKL 134
            .|...:.....:|::...:.:..      :.:.:|:.|..|     |.|.|..||::|::.... 
  Rat    67 EAFRLLAQYFEYRQQNLDMFKSFKATDPGIKQALKDGFPGG-----LANLDHYGRKILVLFAAN- 125

  Fly   135 WDPSDITSDEMFRMLYMVHLAAQLEE-ETQVRGVVCIMDFEGLSMKQVKALSPSFSKRLLTFIQE 198
            ||.|..|..::.|.: ::.|.|.:|: |.||.|.|.|:|:...:.||...|:||..:..:..:|:
  Rat   126 WDQSRYTLVDILRAI-LLSLEAMIEDPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQD 189

  Fly   199 AMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSDMKSLQKFLDPSVLPANYKGTLP 263
            :.|.|...:|||.||:..:.::::.:||:|:|...|:..||:::.||.:.:.|.:||:.:.|.||
  Rat   190 SFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRIFLHGNNLNSLHQLIHPEILPSEFGGMLP 254

  Fly   264 AIDYGGVEWFPAL-----EQQAQY-VEEWS 287
            ..|.|  .|...|     :..::| |:.:|
  Rat   255 PYDMG--TWARTLLDHEYDDDSEYNVDSYS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5958NP_609119.2 CRAL_TRIO_N 38..82 CDD:215024 13/44 (30%)
CRAL_TRIO 111..260 CDD:459890 46/149 (31%)
Clvs2NP_001397251.1 CRAL_TRIO_N 29..75 CDD:215024 13/45 (29%)
SEC14 101..251 CDD:469559 49/156 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..327
Blue background indicates that the domain is not in the aligned region.

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