DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5958 and retm

DIOPT Version :9

Sequence 1:	NP_609119.2	Gene:	CG5958 / 34022	FlyBaseID:	FBgn0031913	Length:	294	Species:	Drosophila melanogaster
Sequence 2:	NP_001260132.1	Gene:	retm / 33899	FlyBaseID:	FBgn0031814	Length:	707	Species:	Drosophila melanogaster

Alignment Length:	256	Identity:	58/256 - (22%)
Similarity:	109/256 - (42%)	Gaps:	39/256 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 IARVELRETEEVKAEAIIKLRELLKATPELNYKDDDAFLTVFLRACHFYPEGALEKMKTTASFRK 89
            ||| .|.:...::...:::||::|....:|........:..||.|..::...|...:..:..:|:
  Fly   210 IAR-SLGQLSPMQESKLLELRKMLDGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRR 273

  Fly    90 EYASLVRGLLVEQVKEKFVKGSVINVLKNCDQKGRRVLIVNCGKLWDPSDITS-------DEMFR 147
            |:.  :..||.|..|...|.........:.|:.||.|.|:..|.:    |:..       |.:.|
  Fly   274 EHR--IDALLAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHM----DVKGLLKSLGMDGLLR 332

  Fly   148 MLYMVHLAAQ----LEE-----ETQVRGVVCIMDFEGLSMKQ-----VKALSPSFSKRLLTFIQE 198
            :  .:|:..:    :.|     |..|.....::|.|||||:.     :|||     ..::..::.
  Fly   333 L--ALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLWRPGIKAL-----LNIIETVER 390

  Fly   199 AMPLRMKEVHFVKQPFIFNMVWSLFKPFVKQKLNNRMHFHGSD---MK-SLQKFLDPSVLP 255
            ..|..|..|..|:.|.:|.:.|::...|:.:...::..|:|.|   || .|.::||..::|
  Fly   391 NYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKDGLAQYLDEEIVP 451

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5958	NP_609119.2	CRAL_TRIO_N	38..82	CDD:215024	8/43 (19%)
CG5958	NP_609119.2	CRAL_TRIO	111..261	CDD:279044	39/170 (23%)
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	8/45 (18%)
		CRAL_TRIO	293..456	CDD:279044	39/170 (23%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810