DRSC/TRiP Functional Genomics Resources

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Protein Alignment muc and LTA3

DIOPT Version :10

Sequence 1:NP_609118.1 Gene:muc / 34021 FlyBaseID:FBgn0283658 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001190070.1 Gene:LTA3 / 824385 AraportID:AT3G52200 Length:713 Species:Arabidopsis thaliana


Alignment Length:466 Identity:190/466 - (40%)
Similarity:258/466 - (55%) Gaps:63/466 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAKILI 139
            ::||.|:.:.:|||||||.:|:|..|.||||||:..||::.||||||||:.||:.|||:||||||
plant   283 SDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILI 347

  Fly   140 QGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAAAPAAPAAAPAPAPAAAAAPPPPPPPAAAP 204
            ..|:|||.||:.:.:||.|..|:.|   .|...|.:                         :...
plant   348 PEGSKDVAVGKPIALIVEDAESIEA---IKSSSAGS-------------------------SEVD 384

  Fly   205 AAAAPPPAPAAAPAAAGTGRVYASPMAKRL-----AEAQQLRLQGK-----GSGVHGSIKSGDLA 259
            .....|.:....|.....|....||.||.|     .||..:...|.     .|.|..:|.||..:
plant   385 TVKEVPDSVVDKPTERKAGFTKISPAAKLLILEHGLEASSIEASGPYGTLLKSDVVAAIASGKAS 449

  Fly   260 GQKAAAK---PAAAAPAKAPRA-------AGARYEDIPVTNMRAVIAKRLLESKTQLPHYYVTVQ 314
            ...|:.|   |:...|:|:...       :...|||.|.:.:|.:|||||||||.::||.|:...
plant   450 KSSASTKKKQPSKETPSKSSSTSKPSVTQSDNNYEDFPNSQIRKIIAKRLLESKQKIPHLYLQSD 514

  Fly   315 CQVDKLLKFRAKVNKKYEKQGARVSVNDFIIKAVAIASLKVPEANSAW----MDTVIRKYDDVDV 375
            ..:|.||.||.::.   |..|.:|||||.:|||||:|...|.:||:.|    .|.|:  .|.||:
plant   515 VVLDPLLAFRKELQ---ENHGVKVSVNDIVIKAVAVALRNVRQANAFWDAEKGDIVM--CDSVDI 574

  Fly   376 SVAVSTDKGLITPIVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQF 440
            |:||:|:|||:|||:.|||:|.:..||.:||.||.|||..||.||||||||.|:|||||:.|:.|
plant   575 SIAVATEKGLMTPIIKNADQKSISAISLEVKELAQKARSGKLAPHEFQGGTFSISNLGMYPVDNF 639

  Fly   441 AAVINPPQSCILAIGTTTKQLVADP----DSLKGFKEVNMLTVTLSADHRVVDGAVAARWLQHFR 501
            .|:|||||:.|||:|...|  |.:|    |.::....|..:.||||||||:.||.|.|.::...|
plant   640 CAIINPPQAGILAVGRGNK--VVEPVIGLDGIEKPSVVTKMNVTLSADHRIFDGQVGASFMSELR 702

  Fly   502 DYMEDPSNMVL 512
            ...||...::|
plant   703 SNFEDVRRLLL 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mucNP_609118.1 PDHac_trf_mito 83..512 CDD:273567 186/456 (41%)
LTA3NP_001190070.1 PRK11892 166..>249 CDD:237011
PDHac_trf_mito 290..713 CDD:273567 186/457 (41%)
Blue background indicates that the domain is not in the aligned region.

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